RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 NFKBIAP25963 317 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 PSMB4P28070 264 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 CD6P30203 668 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 GEMP55040 296 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 PRPSAP1Q14558 356 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 ARMC12Q5T9G4 340 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 FBXL19Q6PCT2 694 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 SLC36A4Q6YBV0 504 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 GSTA5Q7RTV2 222 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 SPATA4Q8NEY3 305 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 SPATA22Q8NHS9 363 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 GAB3Q8WWW8 586 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 GORASP1Q9BQQ3 440 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 BTBD1Q9H0C5 482 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 IRF2BPLQ9H1B7 796 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 NEUROG2Q9H2A3 272 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 PCDH9Q9HC56 1237 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 WSB2Q9NYS7 404 aaPredicted RBP16.13■□□□□ 0.17
GPC1-207ENST00000466624 PHTF1Q9UMS5 762 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 CYP8B1Q9UNU6 501 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 PPIL1Q9Y3C6 166 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 MRFAP1Q9Y605 127 aa16.13■□□□□ 0.17
GPC1-207ENST00000466624 NUMA1Q14980 2115 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 GOLGA6CA6NDK9 693 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 GOLGA6BA6NDN3 693 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 UPK3BL1B0FP48 263 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 UPK3BL2E5RIL1 263 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 GAS8O95995 478 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 MT-CYBP00156 380 aaPredicted RBP16.12■□□□□ 0.17
GPC1-207ENST00000466624 CPP00450 1065 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 EPOP01588 193 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 GOLGA6DP0CG33 693 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 FDFT1P37268 417 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 UGP2Q16851 508 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 POM121L1PQ3SYA9 428 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 FAM182AQ5T1J6 154 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 KDELC1Q6UW63 502 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.12■□□□□ 0.17
GPC1-207ENST00000466624 ZSWIM9Q86XI8 627 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.12■□□□□ 0.17
GPC1-207ENST00000466624 GANCQ8TET4 914 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 OXNAD1Q96HP4 312 aaPredicted RBP16.12■□□□□ 0.17
GPC1-207ENST00000466624 FEM1CQ96JP0 617 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 TRIB3Q96RU7 358 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 DDX47Q9H0S4 455 aaKnown RBP16.12■□□□□ 0.17
GPC1-207ENST00000466624 PCED1AQ9H1Q7 454 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 CD93Q9NPY3 652 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 GOLGA6AQ9NYA3 693 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 PCDHB9Q9Y5E1 797 aa16.12■□□□□ 0.17
GPC1-207ENST00000466624 ERI2A8K979 691 aaKnown RBP16.11■□□□□ 0.17
GPC1-207ENST00000466624 C10orf142B7Z368 130 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 AREL1O15033 823 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 PSMD3O43242 534 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 RPP40O75818 363 aaKnown RBP16.11■□□□□ 0.17
GPC1-207ENST00000466624 METTL18O95568 372 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 ECEL1O95672 775 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 PRLP01236 227 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 TIMP2P16035 220 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 RPL22P35268 128 aaKnown RBP16.11■□□□□ 0.17
GPC1-207ENST00000466624 ADPRHP54922 357 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 CDK18Q07002 472 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 ELP6Q0PNE2 266 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 SPDYCQ5MJ68 293 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 NEK5Q6P3R8 708 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 ZC3H14Q6PJT7 736 aaKnown RBP16.11■□□□□ 0.17
GPC1-207ENST00000466624 SYDE1Q6ZW31 735 aaPredicted RBP16.11■□□□□ 0.17
GPC1-207ENST00000466624 TTC7BQ86TV6 843 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 NDUFAF2Q8N183 169 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 GLIS1Q8NBF1 620 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 PRSS33Q8NF86 280 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 PIH1D2Q8WWB5 315 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 RLN3Q8WXF3 142 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 LRRC45Q96CN5 670 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 TOE1Q96GM8 510 aaKnown RBP16.11■□□□□ 0.17
GPC1-207ENST00000466624 MRGPRX2Q96LB1 330 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 MLPHQ9BV36 600 aaPredicted RBP16.11■□□□□ 0.17
GPC1-207ENST00000466624 ADGRE3Q9BY15 652 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 PREBQ9HCU5 417 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 TPX2Q9ULW0 747 aaKnown RBP16.11■□□□□ 0.17
GPC1-207ENST00000466624 NEU2Q9Y3R4 380 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 FADS3Q9Y5Q0 445 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 THADAQ6YHU6 1953 aa16.11■□□□□ 0.17
GPC1-207ENST00000466624 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.1■□□□□ 0.17
GPC1-207ENST00000466624 LOC285095A0A1B0GVY8 99 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 LRRC72A6NJI9 287 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 PLK4O00444 970 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 TSPAN6O43657 245 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 SEMA4FO95754 770 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 KRT14P02533 472 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 PDHA1P08559 390 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 ETS1P14921 441 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 XPAP23025 273 aaPredicted RBP16.1■□□□□ 0.17
GPC1-207ENST00000466624 ACSL1P33121 698 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 ABL2P42684 1182 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 GRIA4P48058 902 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 WNT3AP56704 352 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 TAS2R38P59533 333 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 TCF15Q12870 199 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 SEMA5AQ13591 1074 aa16.1■□□□□ 0.17
GPC1-207ENST00000466624 DHX34Q14147 1143 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms