RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 CAMK1DQ8IU85 385 aa16.81■□□□□ 0.28
SDHB-203ENST00000466613 TP53INP2Q8IXH6 220 aa16.81■□□□□ 0.28
SDHB-203ENST00000466613 OR4C6Q8NH72 309 aa16.81■□□□□ 0.28
SDHB-203ENST00000466613 CSPG4P5Q96PW8 444 aa16.81■□□□□ 0.28
SDHB-203ENST00000466613 WRAP53Q9BUR4 548 aaKnown RBP16.81■□□□□ 0.28
SDHB-203ENST00000466613 C1QTNF7Q9BXJ2 289 aa16.81■□□□□ 0.28
SDHB-203ENST00000466613 IPO11Q9UI26 975 aaKnown RBP16.81■□□□□ 0.28
SDHB-203ENST00000466613 FAM149AA5PLN7 773 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 H3BM21 787 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 MYO1FO00160 1098 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 CBFA2T2O43439 604 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 SIGLEC6O43699 453 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 CSF2P04141 144 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 GIMD1P0DJR0 217 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 NME1P15531 152 aaKnown RBP16.8■□□□□ 0.28
SDHB-203ENST00000466613 AMPD1P23109 780 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 ACP1P24666 158 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 SERPINA4P29622 427 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 IGFALSP35858 605 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 HNRNPKP61978 463 aaKnown RBP eCLIP16.8■□□□□ 0.28
SDHB-203ENST00000466613 NSUN2Q08J23 767 aaKnown RBP eCLIP16.8■□□□□ 0.28
SDHB-203ENST00000466613 TRIM14Q14142 442 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 HS1BP3Q53T59 392 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 ZNF542PQ5EBM4 170 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 TPRG1LQ5T0D9 272 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 TMPRSS12Q86WS5 348 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 MARCH9Q86YJ5 346 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 TP53I13Q8NBR0 393 aaPredicted RBP16.8■□□□□ 0.28
SDHB-203ENST00000466613 ZNF564Q8TBZ8 553 aaPredicted RBP16.8■□□□□ 0.28
SDHB-203ENST00000466613 ZNF599Q96NL3 588 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 ATP13A3Q9H7F0 1226 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 CAAP1Q9H8G2 361 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 PCDH18Q9HCL0 1135 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 PCDH12Q9NPG4 1184 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 ETNK2Q9NVF9 386 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 LAMA5O15230 3695 aa16.8■□□□□ 0.28
SDHB-203ENST00000466613 ANKRD11Q6UB99 2663 aaPredicted RBP16.79■□□□□ 0.28
SDHB-203ENST00000466613 NEMP2A6NFY4 417 aa16.79■□□□□ 0.28
SDHB-203ENST00000466613 SRRM3A6NNA2 597 aaPredicted RBP16.79■□□□□ 0.28
SDHB-203ENST00000466613 RIOK3O14730 519 aaKnown RBP16.79■□□□□ 0.28
SDHB-203ENST00000466613 FFAR2O15552 330 aa16.79■□□□□ 0.28
SDHB-203ENST00000466613 ALPPL2P10696 532 aa16.79■□□□□ 0.28
SDHB-203ENST00000466613 SERPINB6P35237 376 aa16.79■□□□□ 0.28
SDHB-203ENST00000466613 EIF4A3P38919 411 aaKnown RBP16.79■□□□□ 0.28
SDHB-203ENST00000466613 RENBPP51606 427 aa16.79■□□□□ 0.28
SDHB-203ENST00000466613 YPEL5P62699 121 aa16.79■□□□□ 0.28
SDHB-203ENST00000466613 LBRQ14739 615 aaKnown RBP16.79■□□□□ 0.28
SDHB-203ENST00000466613 TMCO4Q5TGY1 634 aa16.79■□□□□ 0.28
SDHB-203ENST00000466613 SPECC1LQ69YQ0 1117 aa16.79■□□□□ 0.28
SDHB-203ENST00000466613 ERAP2Q6P179 960 aa16.79■□□□□ 0.28
SDHB-203ENST00000466613 KDM7AQ6ZMT4 941 aa16.79■□□□□ 0.28
SDHB-203ENST00000466613 ZSWIM9Q86XI8 627 aa16.79■□□□□ 0.28
SDHB-203ENST00000466613 PROSER1Q86XN7 944 aa16.79■□□□□ 0.28
SDHB-203ENST00000466613 ZNF548Q8NEK5 533 aaPredicted RBP16.79■□□□□ 0.28
SDHB-203ENST00000466613 PSKH2Q96QS6 385 aa16.79■□□□□ 0.28
SDHB-203ENST00000466613 CCDC86Q9H6F5 360 aaKnown RBP16.79■□□□□ 0.28
SDHB-203ENST00000466613 NLGN3Q9NZ94 848 aa16.79■□□□□ 0.28
SDHB-203ENST00000466613 SEPT3Q9UH03 358 aa16.79■□□□□ 0.28
SDHB-203ENST00000466613 ATP8A1Q9Y2Q0 1164 aa16.79■□□□□ 0.28
SDHB-203ENST00000466613 KNTC1P50748 2209 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 LRP4O75096 1905 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 TOR1BO14657 336 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 SCAMP1O15126 338 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 MUSKO15146 869 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 C6P13671 934 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 HNF1BP35680 557 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 MMP12P39900 470 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 SCNN1BP51168 640 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 THOP1P52888 689 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 CDH6P55285 790 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 AP1S1P61966 158 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 DAB2P98082 770 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 BCL2L1Q07817 233 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 SLC10A7Q0GE19 358 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 EIF2B5Q13144 721 aaKnown RBP16.78■□□□□ 0.28
SDHB-203ENST00000466613 CAMK2BQ13554 666 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 PTK2BQ14289 1009 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 KRT81Q14533 505 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 SLC18A3Q16572 532 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 HADHQ16836 314 aaKnown RBP16.78■□□□□ 0.28
SDHB-203ENST00000466613 OR8K1Q8NGG5 319 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 MDM1Q8TC05 714 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 FAM71BQ8TC56 605 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 ECHDC3Q96DC8 303 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 DNAJC7Q99615 494 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 DUSP23Q9BVJ7 150 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 TSPY26PQ9H489 355 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 MBNL1Q9NR56 388 aaKnown RBP16.78■□□□□ 0.28
SDHB-203ENST00000466613 CTTNBP2NLQ9P2B4 639 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 RCOR3Q9P2K3 495 aaPredicted RBP16.78■□□□□ 0.28
SDHB-203ENST00000466613 UVRAGQ9P2Y5 699 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 KLF15Q9UIH9 416 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 COQ6Q9Y2Z9 468 aa16.78■□□□□ 0.28
SDHB-203ENST00000466613 CHD6Q8TD26 2715 aa16.77■□□□□ 0.28
SDHB-203ENST00000466613 TAF4O00268 1085 aa16.77■□□□□ 0.28
SDHB-203ENST00000466613 PEX11BO96011 259 aa16.77■□□□□ 0.28
SDHB-203ENST00000466613 JUNDP17535 347 aa16.77■□□□□ 0.28
SDHB-203ENST00000466613 SSR1P43307 286 aaKnown RBP16.77■□□□□ 0.28
SDHB-203ENST00000466613 LIG3P49916 1009 aa16.77■□□□□ 0.28
SDHB-203ENST00000466613 ZNF235Q14590 738 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms