RNA–Protein interactions for RNA: ENST00000466562.5

CRAMP1-204, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-204ENST00000466562 PSKH2Q96QS6 385 aa16.04■□□□□ 0.16
CRAMP1-204ENST00000466562 CHP1Q99653 195 aa16.04■□□□□ 0.16
CRAMP1-204ENST00000466562 WRAP53Q9BUR4 548 aaKnown RBP16.04■□□□□ 0.16
CRAMP1-204ENST00000466562 DEF6Q9H4E7 631 aa16.04■□□□□ 0.16
CRAMP1-204ENST00000466562 PCDH12Q9NPG4 1184 aa16.04■□□□□ 0.16
CRAMP1-204ENST00000466562 ZNHIT6Q9NWK9 470 aaKnown RBP16.04■□□□□ 0.16
CRAMP1-204ENST00000466562 UCKL1Q9NWZ5 548 aa16.04■□□□□ 0.16
CRAMP1-204ENST00000466562 PCDHGA1Q9Y5H4 931 aa16.04■□□□□ 0.16
CRAMP1-204ENST00000466562 COL5A1P20908 1838 aaPredicted RBP16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 TRPM6Q9BX84 2022 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 TMEM8BA6NDV4 472 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 RIOK3O14730 519 aaKnown RBP16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 MAFKO60675 156 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 MFAP3LO75121 409 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 PIAS2O75928 621 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 PROSCO94903 275 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 CD48P09326 243 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 TPM1P09493 284 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 SERPINA4P29622 427 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 SCNN1BP51168 640 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 RENBPP51606 427 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 ARSEP51690 589 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 ADKP55263 362 aaKnown RBP16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 BCL2L1Q07817 233 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 MMRN1Q13201 1228 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 PDE1CQ14123 709 aaPredicted RBP16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 KRT81Q14533 505 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 SMAD1Q15797 465 aaKnown RBP16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 ATP13A4Q4VNC1 1196 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 TPRG1LQ5T0D9 272 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 CFAP58Q5T655 872 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 TMCO4Q5TGY1 634 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 DHRS13Q6UX07 377 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 GALNT15Q8N3T1 639 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 ECHDC3Q96DC8 303 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 NSMCE3Q96MG7 304 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 ATP13A3Q9H7F0 1226 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 MBNL1Q9NR56 388 aaKnown RBP16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 DNAJC28Q9NX36 388 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 RCOR3Q9P2K3 495 aaPredicted RBP16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 SEPT3Q9UH03 358 aa16.03■□□□□ 0.16
CRAMP1-204ENST00000466562 TRIM38O00635 465 aa16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 SIGLEC6O43699 453 aa16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 AKR1B10O60218 316 aa16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 CSF2P04141 144 aa16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 TMEM253P0C7T8 217 aa16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 GIMD1P0DJR0 217 aa16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 SERPINB6P35237 376 aa16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 IGFALSP35858 605 aa16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 ACADVLP49748 655 aa16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 ZNF211Q13398 564 aaPredicted RBP16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 TSR1Q2NL82 804 aaKnown RBP16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 PROX2Q3B8N5 592 aa16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 ERAP2Q6P179 960 aa16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 PARGQ86W56 976 aa16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 TP53I13Q8NBR0 393 aaPredicted RBP16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 C1QTNF7Q9BXJ2 289 aa16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 NHEJ1Q9H9Q4 299 aaPredicted RBP16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 ZMIZ1Q9ULJ6 1067 aa16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 COQ6Q9Y2Z9 468 aa16.02■□□□□ 0.16
CRAMP1-204ENST00000466562 KMT2BQ9UMN6 2715 aaPredicted RBP16.02■□□□□ 0.15
CRAMP1-204ENST00000466562 TTC24A2A3L6 582 aaPredicted RBP16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 TRAFD1O14545 582 aaPredicted RBP16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 RFPL3O75679 317 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 PRKCGP05129 697 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 C1SP09871 688 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 C6P13671 934 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 NME1P15531 152 aaKnown RBP16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 CKMT2P17540 419 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 CR2P20023 1033 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 GJC1P36383 396 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 MMP12P39900 470 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 TAS2R40P59535 323 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 AP1S1P61966 158 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 HNRNPKP61978 463 aaKnown RBP eCLIP16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 SEMG2Q02383 582 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 DPYSL3Q14195 570 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 ZNF235Q14590 738 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 MARCH9Q86YJ5 346 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 PGBD5Q8N414 524 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 ATPAF2Q8N5M1 289 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 OR4C6Q8NH72 309 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 CCDC42Q96M95 316 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 SPTLC3Q9NUV7 552 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 LCMT1Q9UIC8 334 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 KLF15Q9UIH9 416 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 ATP8A1Q9Y2Q0 1164 aa16.01■□□□□ 0.15
CRAMP1-204ENST00000466562 USP24Q9UPU5 2620 aa16■□□□□ 0.15
CRAMP1-204ENST00000466562 TOR1BO14657 336 aa16■□□□□ 0.15
CRAMP1-204ENST00000466562 SCAMP1O15126 338 aa16■□□□□ 0.15
CRAMP1-204ENST00000466562 FFAR2O15552 330 aa16■□□□□ 0.15
CRAMP1-204ENST00000466562 KRT37O76014 449 aa16■□□□□ 0.15
CRAMP1-204ENST00000466562 CAPNS1P04632 268 aa16■□□□□ 0.15
CRAMP1-204ENST00000466562 CDK4P11802 303 aa16■□□□□ 0.15
CRAMP1-204ENST00000466562 MAN1A1P33908 653 aa16■□□□□ 0.15
CRAMP1-204ENST00000466562 HSPA9P38646 679 aaKnown RBP16■□□□□ 0.15
CRAMP1-204ENST00000466562 LIG3P49916 1009 aa16■□□□□ 0.15
CRAMP1-204ENST00000466562 YPEL5P62699 121 aa16■□□□□ 0.15
CRAMP1-204ENST00000466562 EIF2B5Q13144 721 aaKnown RBP16■□□□□ 0.15
CRAMP1-204ENST00000466562 TBX2Q13207 712 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms