RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 LHX3Q9UBR4 397 aa21.3■■□□□ 1
PPP1R3F-203ENST00000466508 GGA2Q9UJY4 613 aa21.3■■□□□ 1
PPP1R3F-203ENST00000466508 YBX2Q9Y2T7 364 aaKnown RBP21.3■■□□□ 1
PPP1R3F-203ENST00000466508 SZT2Q5T011 3432 aa21.29■■□□□ 1
PPP1R3F-203ENST00000466508 CCDC195A0A1B0GUA6 201 aa21.29■■□□□ 1
PPP1R3F-203ENST00000466508 SOX1O00570 391 aaPredicted RBP21.29■■□□□ 1
PPP1R3F-203ENST00000466508 LMAN2Q12907 356 aa21.29■■□□□ 1
PPP1R3F-203ENST00000466508 RETSATQ6NUM9 610 aa21.29■■□□□ 1
PPP1R3F-203ENST00000466508 RBM23Q86U06 439 aaKnown RBP21.29■■□□□ 1
PPP1R3F-203ENST00000466508 ZNF75CPQ92670 426 aaPredicted RBP21.29■■□□□ 1
PPP1R3F-203ENST00000466508 ELAC2Q9BQ52 826 aaKnown RBP21.29■■□□□ 1
PPP1R3F-203ENST00000466508 GGT7Q9UJ14 662 aa21.29■■□□□ 1
PPP1R3F-203ENST00000466508 CLEC4EQ9ULY5 219 aa21.29■■□□□ 1
PPP1R3F-203ENST00000466508 GLRA3O75311 464 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 PRAMEF12O95522 483 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 HADHAP40939 763 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 SERPINB4P48594 390 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 ZNF470Q6ECI4 717 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 NEPROQ6NW34 567 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 DENND6AQ8IWF6 608 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 BRSK1Q8TDC3 778 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 BLOC1S5Q8TDH9 187 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 GPR22Q99680 433 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 PITPNM3Q9BZ71 974 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.28■■□□□ 1
PPP1R3F-203ENST00000466508 CHKBQ9Y259 395 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 MTO1Q9Y2Z2 717 aaKnown RBP21.28■■□□□ 1
PPP1R3F-203ENST00000466508 NUP210Q8TEM1 1887 aaPredicted RBP21.28■■□□□ 1
PPP1R3F-203ENST00000466508 WDR91A4D1P6 747 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 ZNF197O14709 1029 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 SNX3O60493 162 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 TOP3BO95985 862 aaKnown RBP21.28■■□□□ 1
PPP1R3F-203ENST00000466508 AHSGP02765 367 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 GABRB3P28472 473 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 SLC1A2P43004 574 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 ABCG1P45844 678 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 RHOAP61586 193 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 RALGPS1Q5JS13 557 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 KYAT3Q6YP21 454 aaKnown RBP21.28■■□□□ 1
PPP1R3F-203ENST00000466508 KIAA0408Q6ZU52 694 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 CMC1Q7Z7K0 106 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 ADGRD2Q7Z7M1 963 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 CCDC197Q8NCU1 140 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 C2CD4AQ8NCU7 369 aaPredicted RBP21.28■■□□□ 1
PPP1R3F-203ENST00000466508 GABPB2Q8TAK5 448 aaPredicted RBP21.28■■□□□ 1
PPP1R3F-203ENST00000466508 CALML6Q8TD86 181 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 LRCH3Q96II8 777 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 DCDC2Q9UHG0 476 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 FCF1Q9Y324 198 aaKnown RBP21.28■■□□□ 1
PPP1R3F-203ENST00000466508 RAI2Q9Y5P3 530 aa21.28■■□□□ 1
PPP1R3F-203ENST00000466508 PRRC2BQ5JSZ5 2229 aaKnown RBP21.28■■□□□ 1
PPP1R3F-203ENST00000466508 SLC7A4O43246 635 aa21.27■■□□□ 1
PPP1R3F-203ENST00000466508 MT-CO1P00395 513 aa21.27■■□□□ 1
PPP1R3F-203ENST00000466508 PRKCGP05129 697 aa21.27■■□□□ 1
PPP1R3F-203ENST00000466508 CD70P32970 193 aa21.27■■□□□ 1
PPP1R3F-203ENST00000466508 ACVR1Q04771 509 aa21.27■■□□□ 1
PPP1R3F-203ENST00000466508 CTBP1Q13363 440 aa21.27■■□□□ 1
PPP1R3F-203ENST00000466508 ZNF77Q15935 545 aa21.27■■□□□ 1
PPP1R3F-203ENST00000466508 PLEKHG6Q3KR16 790 aa21.27■■□□□ 1
PPP1R3F-203ENST00000466508 FAM47EQ6ZV65 393 aa21.27■■□□□ 1
PPP1R3F-203ENST00000466508 MICALCLQ6ZW33 695 aa21.27■■□□□ 1
PPP1R3F-203ENST00000466508 ARMC2Q8NEN0 867 aa21.27■■□□□ 1
PPP1R3F-203ENST00000466508 CABS1Q96KC9 395 aa21.27■■□□□ 1
PPP1R3F-203ENST00000466508 PRLP01236 227 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 PBX2P40425 430 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 PLK1P53350 603 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 MPP1Q00013 466 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 SLC12A1Q13621 1099 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 INSCQ1MX18 579 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 PPM1JQ5JR12 505 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 NCEH1Q6PIU2 408 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 ANKS4BQ8N8V4 417 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 GRAMD1AQ96CP6 724 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 RMDN1Q96DB5 314 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 MANSC1Q9H8J5 431 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 CERS4Q9HA82 394 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 SLCO1B3Q9NPD5 702 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 FBXO5Q9UKT4 447 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 RIMKLBQ9ULI2 386 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 PCDHGC4Q9Y5F7 938 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 ARL5AQ9Y689 179 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 MPOP05164 745 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 TCF3P15923 654 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 CEBPBP17676 345 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 USP4Q13107 963 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 GRM3Q14832 879 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 METTL3Q86U44 580 aaKnown RBP21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 TMEM25Q86YD3 366 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 LMLNQ96KR4 655 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 ZSWIM3Q96MP5 696 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 ADGRE3Q9BY15 652 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 MFSD1Q9H3U5 465 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 CAB39LQ9H9S4 337 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 TBC1D14Q9P2M4 693 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 PHTF1Q9UMS5 762 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 C2orf16Q68DN1 1984 aa21.26■□□□□ 0.99
PPP1R3F-203ENST00000466508 CXorf51AA0A1B0GTR3 108 aa21.25■□□□□ 0.99
PPP1R3F-203ENST00000466508 K7ERQ8 282 aa21.25■□□□□ 0.99
PPP1R3F-203ENST00000466508 EDF1O60869 148 aaKnown RBP21.25■□□□□ 0.99
PPP1R3F-203ENST00000466508 PENKP01210 267 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms