RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 FCF1Q9Y324 198 aaKnown RBP18.82■□□□□ 0.6
CAPN3-209ENST00000466222 NUP205Q92621 2012 aa18.81■□□□□ 0.6
CAPN3-209ENST00000466222 PMPCBO75439 489 aa18.81■□□□□ 0.6
CAPN3-209ENST00000466222 MMP2P08253 660 aa18.81■□□□□ 0.6
CAPN3-209ENST00000466222 ADH5P11766 374 aa18.81■□□□□ 0.6
CAPN3-209ENST00000466222 KRT4P19013 534 aa18.81■□□□□ 0.6
CAPN3-209ENST00000466222 MTHFRP42898 656 aa18.81■□□□□ 0.6
CAPN3-209ENST00000466222 STK19P49842 368 aaPredicted RBP18.81■□□□□ 0.6
CAPN3-209ENST00000466222 CRADDP78560 199 aa18.81■□□□□ 0.6
CAPN3-209ENST00000466222 PITRM1Q5JRX3 1037 aa18.81■□□□□ 0.6
CAPN3-209ENST00000466222 CCDC117Q8IWD4 279 aaPredicted RBP18.81■□□□□ 0.6
CAPN3-209ENST00000466222 MPP5Q8N3R9 675 aa18.81■□□□□ 0.6
CAPN3-209ENST00000466222 ARRDC2Q8TBH0 407 aa18.81■□□□□ 0.6
CAPN3-209ENST00000466222 MZB1Q8WU39 189 aa18.81■□□□□ 0.6
CAPN3-209ENST00000466222 C10orf82Q8WW14 230 aa18.81■□□□□ 0.6
CAPN3-209ENST00000466222 SUSD6Q92537 303 aa18.81■□□□□ 0.6
CAPN3-209ENST00000466222 ZNF75CPQ92670 426 aaPredicted RBP18.81■□□□□ 0.6
CAPN3-209ENST00000466222 FCRL5Q96RD9 977 aa18.81■□□□□ 0.6
CAPN3-209ENST00000466222 VPS11Q9H270 941 aa18.81■□□□□ 0.6
CAPN3-209ENST00000466222 NOP53Q9NZM5 478 aaKnown RBP18.81■□□□□ 0.6
CAPN3-209ENST00000466222 IQANK1A0A1B0GTG1 560 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 A0A1W2PPM1 405 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 TROVE2P10155 538 aaKnown RBP eCLIP18.8■□□□□ 0.6
CAPN3-209ENST00000466222 TPSB2P20231 275 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 CD86P42081 329 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 SLC6A11P48066 632 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 FCHO2Q0JRZ9 810 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 ZNF235Q14590 738 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 E2F5Q15329 346 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 TPSAB1Q15661 275 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 GEN1Q17RS7 908 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 GAB4Q2WGN9 574 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 CAPN12Q6ZSI9 719 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 MFSD6LQ8IWD5 586 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 DCAF4L2Q8NA75 395 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 OR52K1Q8NGK4 314 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 SORCS1Q8WY21 1168 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 MARK1Q9P0L2 795 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 CHKBQ9Y259 395 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.8■□□□□ 0.6
CAPN3-209ENST00000466222 DENND4CQ5VZ89 1909 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 NYNRINQ9P2P1 1898 aaKnown RBP18.8■□□□□ 0.6
CAPN3-209ENST00000466222 BPTFQ12830 3046 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 TMCC1O94876 653 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 AP2A1O95782 977 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 BMP1P13497 986 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 SSTR1P30872 391 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 PCSK7Q16549 785 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 SFTPA1Q8IWL2 248 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 IPMKQ8NFU5 416 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 AGAP11Q8TF27 550 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 DCAKDQ8WVC6 231 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 ERP27Q96DN0 273 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 ZNF599Q96NL3 588 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 GUCD1Q96NT3 240 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 SEMA3CQ99985 751 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 GRID1Q9ULK0 1009 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 RPL26L1Q9UNX3 145 aaKnown RBP18.8■□□□□ 0.6
CAPN3-209ENST00000466222 NUMBLQ9Y6R0 609 aa18.8■□□□□ 0.6
CAPN3-209ENST00000466222 ANTXRLA6NF34 631 aa18.79■□□□□ 0.6
CAPN3-209ENST00000466222 PABPC1P11940 636 aaKnown RBP18.79■□□□□ 0.6
CAPN3-209ENST00000466222 SESN2P58004 480 aaPredicted RBP18.79■□□□□ 0.6
CAPN3-209ENST00000466222 ADIPOR2Q86V24 386 aa18.79■□□□□ 0.6
CAPN3-209ENST00000466222 BANPQ8N9N5 519 aa18.79■□□□□ 0.6
CAPN3-209ENST00000466222 IMP4Q96G21 291 aaKnown RBP18.79■□□□□ 0.6
CAPN3-209ENST00000466222 ANKRD27Q96NW4 1050 aa18.79■□□□□ 0.6
CAPN3-209ENST00000466222 PSKH2Q96QS6 385 aa18.79■□□□□ 0.6
CAPN3-209ENST00000466222 C2orf49Q9BVC5 232 aaPredicted RBP18.79■□□□□ 0.6
CAPN3-209ENST00000466222 CINPQ9BW66 212 aaPredicted RBP18.79■□□□□ 0.6
CAPN3-209ENST00000466222 SLC25A51Q9H1U9 297 aa18.79■□□□□ 0.6
CAPN3-209ENST00000466222 THG1LQ9NWX6 298 aaKnown RBP18.79■□□□□ 0.6
CAPN3-209ENST00000466222 OBP2AQ9NY56 170 aa18.79■□□□□ 0.6
CAPN3-209ENST00000466222 TPH1P17752 444 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 PSMC3P17980 439 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 CHRNA4P43681 627 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 SCNN1BP51168 640 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 TLDC1Q6P9B6 456 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 OTOAQ7RTW8 1153 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 KIF2BQ8N4N8 673 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 MCUQ8NE86 351 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 ATP2A3Q93084 1043 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 RSRC1Q96IZ7 334 aaKnown RBP18.78■□□□□ 0.6
CAPN3-209ENST00000466222 MRGPRX2Q96LB1 330 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 TM6SF2Q9BZW4 377 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 UBE2ZQ9H832 354 aaPredicted RBP18.78■□□□□ 0.6
CAPN3-209ENST00000466222 SAR1AQ9NR31 198 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 SEPT3Q9UH03 358 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 CHMP2BQ9UQN3 213 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 TRAFD1O14545 582 aaPredicted RBP18.78■□□□□ 0.6
CAPN3-209ENST00000466222 TULP3O75386 442 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 ZNF189O75820 626 aaPredicted RBP18.78■□□□□ 0.6
CAPN3-209ENST00000466222 PIAS1O75925 651 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 FAM155BO75949 473 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 ADH1CP00326 375 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 CISD3P0C7P0 127 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 GDI1P31150 447 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 ELK3P41970 407 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 MAGEA3P43357 314 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 PRPSAP1Q14558 356 aa18.78■□□□□ 0.6
CAPN3-209ENST00000466222 ATXN7L2Q5T6C5 722 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms