RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 LRRK1Q38SD2 2015 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 LMO7DNF2Z398 122 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 GOLGA6L22H0YM25 854 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 INSIG1O15503 277 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 PRAMEF11O60813 436 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 CSO75390 466 aaKnown RBP12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 MBD3O95983 291 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 MYF5P13349 255 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 TNFAIP3P21580 790 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 LSSP48449 732 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 CSNK1DP48730 415 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 TPI1P60174 286 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 MAMLD1Q13495 774 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 NR0B2Q15466 257 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 KLHL40Q2TBA0 621 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 DEFB133Q30KQ1 61 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 LRRC73Q5JTD7 316 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 IGF2-ASQ6U949 168 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 VPS36Q86VN1 386 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 PHACTR4Q8IZ21 702 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 GLMNQ92990 594 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 ZNF641Q96N77 438 aaPredicted RBP12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 TUBGCP5Q96RT8 1024 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 IL12RB2Q99665 862 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 LRRC61Q9BV99 259 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 TCEAL2Q9H3H9 227 aaPredicted RBP12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 SUV39H2Q9H5I1 410 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 MBNL1Q9NR56 388 aaKnown RBP12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 PARVAQ9NVD7 372 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 TAS2R14Q9NYV8 317 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 PNMA8BQ9ULN7 279 aaPredicted RBP12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 AP4E1Q9UPM8 1137 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 RP1P56715 2156 aa12.59□□□□□ -0.39
SOX2-OT-203ENST00000466034 CFAP69A5D8W1 941 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 ARHGAP42A6NI28 874 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 TMEM110-MUSTN1A8MSY1 372 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 GCATO75600 419 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 TCEA3O75764 348 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 PIGNO95427 931 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 ATP1A3P13637 1013 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 ITIH2P19823 946 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 TGM2P21980 687 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 EIF4A3P38919 411 aaKnown RBP12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 RPIAP49247 311 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 BLKP51451 505 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 ZNF135P52742 658 aaPredicted RBP12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 ERVPABLB-1P60509 514 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 IRF4Q15306 451 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 CDKN3Q16667 212 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 UGP2Q16851 508 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 C6orf132Q5T0Z8 1188 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 AFMIDQ63HM1 303 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 GUSBP11Q6P575 273 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 BRAT1Q6PJG6 821 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 EFL1Q7Z2Z2 1120 aaKnown RBP12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 PSTKQ8IV42 348 aaKnown RBP12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 RBFAQ8N0V3 343 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 SDR16C5Q8N3Y7 309 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 FSTL5Q8N475 847 aaPredicted RBP12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 AOPEPQ8N6M6 819 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 NETO2Q8NC67 525 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 LSM14AQ8ND56 463 aaKnown RBP12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 ZNF248Q8NDW4 579 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 WDR48Q8TAF3 677 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 FNIP1Q8TF40 1166 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 HIC2Q96JB3 615 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 NCAPGQ9BPX3 1015 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 BPIFA3Q9BQP9 254 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 WRAP53Q9BUR4 548 aaKnown RBP12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 SLC13A1Q9BZW2 595 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 ABCG4Q9H172 646 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 POLR1BQ9H9Y6 1135 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 SHROOM3Q8TF72 1996 aa12.58□□□□□ -0.4
SOX2-OT-203ENST00000466034 LRP4O75096 1905 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 TMEM191CA6NGB0 347 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 J3KR12 359 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 TK2O00142 265 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 EEF2KO00418 725 aaKnown RBP12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 TEX33O43247 280 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 BUB1BO60566 1050 aaPredicted RBP12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 USP12O75317 370 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 ANXA6P08133 673 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 GZMAP12544 262 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 C6P13671 934 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 XPAP23025 273 aaPredicted RBP12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 PSMA2P25787 234 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 MMP12P39900 470 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 PRKCIP41743 596 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 ADKP55263 362 aaKnown RBP12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 PCBP4P57723 403 aaKnown RBP12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 GABREP78334 506 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 PPARDQ03181 441 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 TLE3Q04726 772 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 TYRO3Q06418 890 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 LRRC14Q15048 493 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 CA9Q16790 459 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 ISXQ2M1V0 245 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 WSCD2Q2TBF2 565 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 PRRT3Q5FWE3 981 aa12.57□□□□□ -0.4
SOX2-OT-203ENST00000466034 ERMARDQ5T6L9 678 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms