RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ZMIZ1Q9ULJ6 1067 aa21.99■■□□□ 1.11
LIME1-203ENST00000465591 COQ6Q9Y2Z9 468 aa21.99■■□□□ 1.11
LIME1-203ENST00000465591 FPGTO14772 594 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 CAPNS1P04632 268 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 ACADVLP49748 655 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 ADKP55263 362 aaKnown RBP21.98■■□□□ 1.11
LIME1-203ENST00000465591 CDH6P55285 790 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 TAS2R40P59535 323 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 PFN3P60673 137 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 TRIM14Q14142 442 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 UGP2Q16851 508 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 TMEM52BQ4KMG9 183 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 TMCO3Q6UWJ1 677 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 DENND6BQ8NEG7 585 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 FAM174AQ8TBP5 190 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 FAM71BQ8TC56 605 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 CXorf40AQ8TE69 158 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 ZNF641Q96N77 438 aaPredicted RBP21.98■■□□□ 1.11
LIME1-203ENST00000465591 TUBGCP5Q96RT8 1024 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 ABHD10Q9NUJ1 306 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 DNAJC28Q9NX36 388 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 CTTNBP2NLQ9P2B4 639 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 KLF15Q9UIH9 416 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 MYLKQ15746 1914 aa21.98■■□□□ 1.11
LIME1-203ENST00000465591 APC2O95996 2303 aa21.97■■□□□ 1.11
LIME1-203ENST00000465591 SPTY2D1-AS1A0A0U1RR47 76 aa21.97■■□□□ 1.11
LIME1-203ENST00000465591 FAM149AA5PLN7 773 aa21.97■■□□□ 1.11
LIME1-203ENST00000465591 SIGLEC6O43699 453 aa21.97■■□□□ 1.11
LIME1-203ENST00000465591 MAFKO60675 156 aa21.97■■□□□ 1.11
LIME1-203ENST00000465591 TM7SF2O76062 418 aa21.97■■□□□ 1.11
LIME1-203ENST00000465591 GJC1P36383 396 aa21.97■■□□□ 1.11
LIME1-203ENST00000465591 SSR1P43307 286 aaKnown RBP21.97■■□□□ 1.11
LIME1-203ENST00000465591 RABIFP47224 123 aa21.97■■□□□ 1.11
LIME1-203ENST00000465591 PDE1CQ14123 709 aaPredicted RBP21.97■■□□□ 1.11
LIME1-203ENST00000465591 RFTN1Q14699 578 aaPredicted RBP21.97■■□□□ 1.11
LIME1-203ENST00000465591 LBRQ14739 615 aaKnown RBP21.97■■□□□ 1.11
LIME1-203ENST00000465591 GRM3Q14832 879 aa21.97■■□□□ 1.11
LIME1-203ENST00000465591 PROX2Q3B8N5 592 aa21.97■■□□□ 1.11
LIME1-203ENST00000465591 TMCO4Q5TGY1 634 aa21.97■■□□□ 1.11
LIME1-203ENST00000465591 PGBD5Q8N414 524 aa21.97■■□□□ 1.11
LIME1-203ENST00000465591 TP53I13Q8NBR0 393 aaPredicted RBP21.97■■□□□ 1.11
LIME1-203ENST00000465591 HCAR2Q8TDS4 363 aa21.97■■□□□ 1.11
LIME1-203ENST00000465591 PSKH2Q96QS6 385 aa21.97■■□□□ 1.11
LIME1-203ENST00000465591 PNMA8BQ9ULN7 279 aaPredicted RBP21.97■■□□□ 1.11
LIME1-203ENST00000465591 ACACAQ13085 2346 aa21.96■■□□□ 1.11
LIME1-203ENST00000465591 SSU72P8A0A1W2PR75 194 aa21.96■■□□□ 1.11
LIME1-203ENST00000465591 RIOK3O14730 519 aaKnown RBP21.96■■□□□ 1.11
LIME1-203ENST00000465591 FFAR2O15552 330 aa21.96■■□□□ 1.11
LIME1-203ENST00000465591 ZZEF1O43149 2961 aa21.96■■□□□ 1.11
LIME1-203ENST00000465591 MFAP3LO75121 409 aa21.96■■□□□ 1.11
LIME1-203ENST00000465591 PROSCO94903 275 aa21.96■■□□□ 1.11
LIME1-203ENST00000465591 H2AFZP0C0S5 128 aa21.96■■□□□ 1.11
LIME1-203ENST00000465591 XPAP23025 273 aaPredicted RBP21.96■■□□□ 1.11
LIME1-203ENST00000465591 NSUN2Q08J23 767 aaKnown RBP eCLIP21.96■■□□□ 1.11
LIME1-203ENST00000465591 EIF2B5Q13144 721 aaKnown RBP21.96■■□□□ 1.11
LIME1-203ENST00000465591 KRT81Q14533 505 aa21.96■■□□□ 1.11
LIME1-203ENST00000465591 SMAD1Q15797 465 aaKnown RBP21.96■■□□□ 1.11
LIME1-203ENST00000465591 H2AFVQ71UI9 128 aa21.96■■□□□ 1.11
LIME1-203ENST00000465591 DCP2Q8IU60 420 aaKnown RBP21.96■■□□□ 1.11
LIME1-203ENST00000465591 ZCCHC14Q8WYQ9 949 aaKnown RBP21.96■■□□□ 1.11
LIME1-203ENST00000465591 ECHDC3Q96DC8 303 aa21.96■■□□□ 1.11
LIME1-203ENST00000465591 IFT43Q96FT9 208 aa21.96■■□□□ 1.11
LIME1-203ENST00000465591 ATP13A3Q9H7F0 1226 aa21.96■■□□□ 1.11
LIME1-203ENST00000465591 SPTLC3Q9NUV7 552 aa21.96■■□□□ 1.11
LIME1-203ENST00000465591 SEPT3Q9UH03 358 aa21.96■■□□□ 1.11
LIME1-203ENST00000465591 PCDHGA1Q9Y5H4 931 aa21.96■■□□□ 1.11
LIME1-203ENST00000465591 DMXL2Q8TDJ6 3036 aa21.96■■□□□ 1.11
LIME1-203ENST00000465591 ASXL3Q9C0F0 2248 aa21.95■■□□□ 1.1
LIME1-203ENST00000465591 TRAFD1O14545 582 aaPredicted RBP21.95■■□□□ 1.1
LIME1-203ENST00000465591 C6P13671 934 aa21.95■■□□□ 1.1
LIME1-203ENST00000465591 NME1P15531 152 aaKnown RBP21.95■■□□□ 1.1
LIME1-203ENST00000465591 MMP12P39900 470 aa21.95■■□□□ 1.1
LIME1-203ENST00000465591 SCNN1BP51168 640 aa21.95■■□□□ 1.1
LIME1-203ENST00000465591 SUOXP51687 545 aa21.95■■□□□ 1.1
LIME1-203ENST00000465591 ELP6Q0PNE2 266 aa21.95■■□□□ 1.1
LIME1-203ENST00000465591 RALGDSQ12967 914 aa21.95■■□□□ 1.1
LIME1-203ENST00000465591 DPYSL3Q14195 570 aa21.95■■□□□ 1.1
LIME1-203ENST00000465591 IRF4Q15306 451 aa21.95■■□□□ 1.1
LIME1-203ENST00000465591 BRAT1Q6PJG6 821 aa21.95■■□□□ 1.1
LIME1-203ENST00000465591 OR4C6Q8NH72 309 aa21.95■■□□□ 1.1
LIME1-203ENST00000465591 CTNNBL1Q8WYA6 563 aaPredicted RBP21.95■■□□□ 1.1
LIME1-203ENST00000465591 ZNF599Q96NL3 588 aa21.95■■□□□ 1.1
LIME1-203ENST00000465591 UVRAGQ9P2Y5 699 aa21.95■■□□□ 1.1
LIME1-203ENST00000465591 ATP8A1Q9Y2Q0 1164 aa21.95■■□□□ 1.1
LIME1-203ENST00000465591 FREM2Q5SZK8 3169 aa21.95■■□□□ 1.1
LIME1-203ENST00000465591 PKD1L2Q7Z442 2459 aa21.95■■□□□ 1.1
LIME1-203ENST00000465591 TMEM8BA6NDV4 472 aa21.94■■□□□ 1.1
LIME1-203ENST00000465591 MFSD11O43934 449 aa21.94■■□□□ 1.1
LIME1-203ENST00000465591 RFPL3O75679 317 aa21.94■■□□□ 1.1
LIME1-203ENST00000465591 NEBLO76041 1014 aa21.94■■□□□ 1.1
LIME1-203ENST00000465591 CSF2P04141 144 aa21.94■■□□□ 1.1
LIME1-203ENST00000465591 CR2P20023 1033 aa21.94■■□□□ 1.1
LIME1-203ENST00000465591 SERPINA4P29622 427 aa21.94■■□□□ 1.1
LIME1-203ENST00000465591 BCL2L1Q07817 233 aa21.94■■□□□ 1.1
LIME1-203ENST00000465591 ZNF211Q13398 564 aaPredicted RBP21.94■■□□□ 1.1
LIME1-203ENST00000465591 HADHQ16836 314 aaKnown RBP21.94■■□□□ 1.1
LIME1-203ENST00000465591 WSCD2Q2TBF2 565 aa21.94■■□□□ 1.1
LIME1-203ENST00000465591 PARGQ86W56 976 aa21.94■■□□□ 1.1
LIME1-203ENST00000465591 PCDH19Q8TAB3 1148 aa21.94■■□□□ 1.1
LIME1-203ENST00000465591 TCEAL2Q9H3H9 227 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms