RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 CTCFLQ8NI51 663 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 BICD2Q8TD16 824 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 MAML1Q92585 1016 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 ZNF75CPQ92670 426 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 USP6NLQ92738 828 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 LTV1Q96GA3 475 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 C8orf76Q96K31 380 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 C1orf74Q96LT6 269 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 SERINC2Q96SA4 455 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 NAP1L3Q99457 506 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 MPHOSPH6Q99547 160 aaKnown RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 OSBPL10Q9BXB5 764 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 VCX3BQ9H321 246 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 AS3MTQ9HBK9 375 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 MYOZ2Q9NPC6 264 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 TCF7L2Q9NQB0 619 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 ZSCAN32Q9NX65 697 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 UBAP1Q9NZ09 502 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 HDAC6Q9UBN7 1215 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 GTF3C4Q9UKN8 822 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 PCDHA6Q9UN73 950 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 ZNF510Q9Y2H8 683 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 COL4A3BPQ9Y5P4 624 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 COL6A5A8TX70 2615 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 RTTNQ86VV8 2226 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 COL11A1P12107 1806 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 GOLGA6L10A0A0M3HER8 536 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 LINC00854A0A1B0GVQ3 168 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 M0R3H8 397 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 FOXN3O00409 490 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 ACOT8O14734 319 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 TBC1D4O60343 1298 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 B3GALNT1O75752 331 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 ZNF189O75820 626 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 TIMP1P01033 207 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 CYP1A2P05177 515 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 RPSAP08865 295 aaKnown RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 FGF2P09038 288 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 IDO1P14902 403 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 CD9P21926 228 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 CCND1P24385 295 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 S100A5P33763 92 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 MATR3P43243 847 aaKnown RBP eCLIP3.22□□□□□ -1.891e-6■■■■□ 24.2
CD55-207ENST00000465534 NEK2P51955 445 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 MAP2K6P52564 334 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 UCP3P55916 312 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 WNT3P56703 355 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 HILS1P60008 231 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 YPEL5P62699 121 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 TLE2Q04725 743 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 BTG3Q14201 252 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 RCN1Q15293 331 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 AASDHQ4L235 1098 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 TAF1BQ53T94 588 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 DCAF6Q58WW2 860 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 MAP3K21Q5TCX8 1036 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 ZNF324BQ6AW86 544 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 CCSAPQ6IQ19 270 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 UNC5DQ6UXZ4 953 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 ATF7IPQ6VMQ6 1270 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 MCM10Q7L590 875 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 KIAA1328Q86T90 577 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 TTC39CQ8N584 583 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 LILRB1Q8NHL6 650 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 GSDMBQ8TAX9 411 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 SUN5Q8TC36 379 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 TMEM171Q8WVE6 324 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 IP6K1Q92551 441 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 N4BP2L2Q92802 583 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 PPP2R3CQ969Q6 453 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 C8orf48Q96LL4 319 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 NTPCRQ9BSD7 190 aaKnown RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 ZSCAN16Q9H4T2 348 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 SYNCQ9H7C4 482 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 TMEM8AQ9HCN3 771 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 PCDH12Q9NPG4 1184 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 CNNM1Q9NRU3 951 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 DDX56Q9NY93 547 aaKnown RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 SEPT10Q9P0V9 454 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 MGAT4CQ9UBM8 478 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 DDX25Q9UHL0 483 aaKnown RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 TRHDEQ9UKU6 1024 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 TPCN1Q9ULQ1 816 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 USP22Q9UPT9 525 aa3.22□□□□□ -1.89
CD55-207ENST00000465534 LUC7L2Q9Y383 392 aaKnown RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 HEMK1Q9Y5R4 338 aaPredicted RBP3.22□□□□□ -1.89
CD55-207ENST00000465534 CACNA1EQ15878 2313 aa3.21□□□□□ -1.89
CD55-207ENST00000465534 NBASA2RRP1 2371 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 GRIN2DO15399 1336 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 SPENQ96T58 3664 aaKnown RBP3.21□□□□□ -1.9
CD55-207ENST00000465534 LRBAP50851 2863 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 A0A087WUV0 522 aaPredicted RBP3.21□□□□□ -1.9
CD55-207ENST00000465534 EIF3CLB5ME19 914 aaKnown RBP3.21□□□□□ -1.9
CD55-207ENST00000465534 KIF28PB7ZC32 967 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 M0QX08 132 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 TTI1O43156 1089 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 AHCYL1O43865 530 aa3.21□□□□□ -1.9
CD55-207ENST00000465534 CEP104O60308 925 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms