RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 SERAC1Q96JX3 654 aa12.15□□□□□ -0.46
RPUSD3-211ENST00000464783 PDLIM2Q96JY6 352 aa12.15□□□□□ -0.46
RPUSD3-211ENST00000464783 SEMA3CQ99985 751 aa12.15□□□□□ -0.46
RPUSD3-211ENST00000464783 EDEM2Q9BV94 578 aa12.15□□□□□ -0.46
RPUSD3-211ENST00000464783 GTPBP2Q9BX10 602 aaKnown RBP12.15□□□□□ -0.46
RPUSD3-211ENST00000464783 CEP41Q9BYV8 373 aa12.15□□□□□ -0.46
RPUSD3-211ENST00000464783 NOD2Q9HC29 1040 aa12.15□□□□□ -0.46
RPUSD3-211ENST00000464783 TM9SF3Q9HD45 589 aa12.15□□□□□ -0.46
RPUSD3-211ENST00000464783 AASDHPPTQ9NRN7 309 aa12.15□□□□□ -0.46
RPUSD3-211ENST00000464783 AMACRQ9UHK6 382 aa12.15□□□□□ -0.46
RPUSD3-211ENST00000464783 ITM2BQ9Y287 266 aa12.15□□□□□ -0.46
RPUSD3-211ENST00000464783 PCDHGC4Q9Y5F7 938 aa12.15□□□□□ -0.46
RPUSD3-211ENST00000464783 PIEZO1Q92508 2521 aa12.15□□□□□ -0.46
RPUSD3-211ENST00000464783 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 LNP1A1A4G5 178 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 TSPAN11A1L157 253 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 GOLGA6L9A6NEM1 432 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 UPK3BL1B0FP48 263 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 UPK3BL2E5RIL1 263 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 H7C0C1 242 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 SLC31A1O15431 190 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 DDX3YO15523 660 aaKnown RBP12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 ZSCAN12O43309 604 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 SOCS5O75159 536 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 SYPP08247 313 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 TIMP2P16035 220 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 CR2P20023 1033 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 CA4P22748 312 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 NFKBIAP25963 317 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 PTPN7P35236 360 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 NUDT1P36639 197 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 ATP5OP48047 213 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 SUOXP51687 545 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 RPS21P63220 83 aaKnown RBP12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 RACK1P63244 317 aaKnown RBP12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 IRX4P78413 519 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 IFI35P80217 286 aaPredicted RBP12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 UGP2Q16851 508 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 SLC45A4Q5BKX6 768 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 SEL1L2Q5TEA6 688 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 SEL1L3Q68CR1 1132 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 TRIM58Q8NG06 486 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 VOPP1Q96AW1 172 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 SKA1Q96BD8 255 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 SLC6A18Q96N87 628 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 AGAP3Q96P47 875 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 FERMT1Q9BQL6 677 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 WRAP53Q9BUR4 548 aaKnown RBP12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 FSCN3Q9NQT6 498 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 GGT7Q9UJ14 662 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 DMTF1Q9Y222 760 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 EFR3BQ9Y2G0 817 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 PCDH15Q96QU1 1955 aa12.14□□□□□ -0.47
RPUSD3-211ENST00000464783 A0A1W2PQ67 120 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 LATO43561 262 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 GDF9O60383 454 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 CPP00450 1065 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 PRKCGP05129 697 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 PRLRP16471 622 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 ENGP17813 658 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 CES1P23141 567 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 CSNK1EP49674 416 aaKnown RBP12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 C21orf59P57076 290 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 FAM193AP78312 1265 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 ARHGAP8P85298 464 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 OTUD4Q01804 1114 aaKnown RBP12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 DSC2Q02487 901 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 ZBTB17Q13105 803 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 SGCGQ13326 291 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 STAT4Q14765 748 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 PRKD1Q15139 912 aaPredicted RBP12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 RPS6KA1Q15418 735 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 ARMC12Q5T9G4 340 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 NAPEPLDQ6IQ20 393 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 ZSCAN30Q86W11 494 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 UBE2Q2Q8WVN8 375 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 IL12RB2Q99665 862 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 MYOCQ99972 504 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 HERPUD2Q9BSE4 406 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 SLC17A9Q9BYT1 436 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 KCNF1Q9H3M0 494 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 EBF2Q9HAK2 575 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 CAPN10Q9HC96 672 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 PCDH12Q9NPG4 1184 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 TMEM9BQ9NQ34 198 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 CDV3Q9UKY7 258 aaKnown RBP12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 ATP8A1Q9Y2Q0 1164 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 PCDHB9Q9Y5E1 797 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 RAI2Q9Y5P3 530 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 SLCO1B1Q9Y6L6 691 aa12.13□□□□□ -0.47
RPUSD3-211ENST00000464783 PTPRZ1P23471 2315 aaPredicted RBP12.12□□□□□ -0.47
RPUSD3-211ENST00000464783 GVINP1Q7Z2Y8 2422 aa12.12□□□□□ -0.47
RPUSD3-211ENST00000464783 A0A1B0GVT2 93 aa12.12□□□□□ -0.47
RPUSD3-211ENST00000464783 IGLON5A6NGN9 336 aa12.12□□□□□ -0.47
RPUSD3-211ENST00000464783 HACD1B0YJ81 288 aa12.12□□□□□ -0.47
RPUSD3-211ENST00000464783 PRAMEF26H0Y7S4 382 aa12.12□□□□□ -0.47
RPUSD3-211ENST00000464783 TRAFD1O14545 582 aaPredicted RBP12.12□□□□□ -0.47
RPUSD3-211ENST00000464783 ARHGAP33O14559 1287 aa12.12□□□□□ -0.47
RPUSD3-211ENST00000464783 AREL1O15033 823 aa12.12□□□□□ -0.47
RPUSD3-211ENST00000464783 MTSS1O43312 755 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms