RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CENPSQ8N2Z9 138 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 LRRC52Q8N7C0 313 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 PCYOX1LQ8NBM8 494 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 SHCBP1Q8NEM2 672 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 CANT1Q8WVQ1 401 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 TRUB1Q8WWH5 349 aaKnown RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 SLC35B4Q969S0 331 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 NXNL1Q96CM4 212 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 HDAC11Q96DB2 347 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 KIF12Q96FN5 646 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 CENPNQ96H22 339 aaPredicted RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 MS4A3Q96HJ5 214 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 SNX27Q96L92 541 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 NPY6RQ99463 290 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 HOPXQ9BPY8 73 aaPredicted RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 SGIP1Q9BQI5 828 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 OSBPL2Q9H1P3 480 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 MUC13Q9H3R2 512 aa7.36□□□□□ -1.23
USP48-206ENST00000464577 ZNF277Q9NRM2 450 aaPredicted RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 TRPC5Q9UL62 973 aaPredicted RBP7.36□□□□□ -1.23
USP48-206ENST00000464577 FNDC1Q4ZHG4 1894 aaPredicted RBP7.35□□□□□ -1.23
USP48-206ENST00000464577 RALGAPA2Q2PPJ7 1873 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 FAM95CA0A1B0GW59 222 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 A0A1W2PPW3 197 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 DHRS12A0PJE2 317 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 GPC4O75487 556 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 SULT1C4O75897 302 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 AHSGP02765 367 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 GPIP06744 558 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 GNAO1P09471 354 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 JUNBP17275 347 aaPredicted RBP7.35□□□□□ -1.23
USP48-206ENST00000464577 ARF4P18085 180 aaPredicted RBP7.35□□□□□ -1.23
USP48-206ENST00000464577 UGT1A6P19224 532 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 NFKB1P19838 968 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 IL10P22301 178 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 UGT1A1P22309 533 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 UGT1A4P22310 534 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 FASP25445 335 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 EPHX2P34913 555 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 UGT1A3P35503 534 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 UGT1A5P35504 534 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 AVPR1AP37288 418 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 CAPGP40121 348 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 GRM5P41594 1212 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 GRIA3P42263 894 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 HLCSP50747 726 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 CCT8P50990 548 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 TMBIM6P55061 237 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 ZNF280AP59817 542 aaPredicted RBP7.35□□□□□ -1.23
USP48-206ENST00000464577 SCAPQ12770 1279 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 SEMA3BQ13214 749 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 MTA1Q13330 715 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 BTG3Q14201 252 aaPredicted RBP7.35□□□□□ -1.23
USP48-206ENST00000464577 PRPSAP1Q14558 356 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 LY6KQ17RY6 165 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 TMTC4Q5T4D3 741 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 MEX3CQ5U5Q3 659 aaKnown RBP7.35□□□□□ -1.23
USP48-206ENST00000464577 GPR107Q5VW38 600 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 ANKRD26P1Q6NSI1 321 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 PKN3Q6P5Z2 889 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 CUZD1Q86UP6 607 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 CCDC117Q8IWD4 279 aaPredicted RBP7.35□□□□□ -1.23
USP48-206ENST00000464577 SIX6OS1Q8N1H7 587 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 CRYBG2Q8N1P7 616 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 C7orf31Q8N865 590 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 NETO2Q8NC67 525 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 TRAPPC12Q8WVT3 735 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.35□□□□□ -1.23
USP48-206ENST00000464577 NTAN1Q96AB6 310 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 SLC9A7Q96T83 725 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 HNRNPABQ99729 332 aaKnown RBP7.35□□□□□ -1.23
USP48-206ENST00000464577 TRMOQ9BU70 441 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 SMARCAD1Q9H4L7 1026 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 POLR1BQ9H9Y6 1135 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 PLEKHA5Q9HAU0 1116 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 CCDC167Q9P0B6 97 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 STAP1Q9ULZ2 295 aa7.35□□□□□ -1.23
USP48-206ENST00000464577 TTC24A2A3L6 582 aaPredicted RBP7.34□□□□□ -1.23
USP48-206ENST00000464577 UNCXA6NJT0 531 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 ACOX3O15254 700 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 CLOCKO15516 846 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 CACNG3O60359 315 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 FUCA1P04066 466 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 TFPTP0C1Z6 253 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 ERCC2P18074 760 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 SAT1P21673 171 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 PSMA4P25789 261 aaKnown RBP7.34□□□□□ -1.23
USP48-206ENST00000464577 ADORA2BP29275 332 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 CCR3P51677 355 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 ZNF135P52742 658 aaPredicted RBP7.34□□□□□ -1.23
USP48-206ENST00000464577 C1QTNF8P60827 252 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 STX1BP61266 288 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 POU4F1Q01851 419 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 CXCL9Q07325 125 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 FOXM1Q08050 763 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 TECRLQ5HYJ1 363 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 PCID2Q5JVF3 399 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 CCNYL2Q5T2Q4 361 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 NANOGP8Q6NSW7 305 aa7.34□□□□□ -1.23
USP48-206ENST00000464577 FAM117BQ6P1L5 589 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms