RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 RHOT2Q8IXI1 618 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 ATPAF2Q8N5M1 289 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 HCAR2Q8TDS4 363 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 CENPTQ96BT3 561 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 ECHDC3Q96DC8 303 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 CNTNAP3BQ96NU0 1288 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 LENG8Q96PV6 779 aaPredicted RBP13.09□□□□□ -0.31
XRN1-203ENST00000463916 TUBGCP5Q96RT8 1024 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 CNTNAP3Q9BZ76 1288 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 INTUQ9ULD6 942 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 HS3ST3A1Q9Y663 406 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 SHROOM3Q8TF72 1996 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 ZZEF1O43149 2961 aa13.09□□□□□ -0.31
XRN1-203ENST00000463916 ANKRD36A6QL64 1941 aa13.08□□□□□ -0.31
XRN1-203ENST00000463916 C3orf70A6NLC5 250 aaPredicted RBP13.08□□□□□ -0.32
XRN1-203ENST00000463916 RIOK3O14730 519 aaKnown RBP13.08□□□□□ -0.32
XRN1-203ENST00000463916 HYAL3O43820 417 aaPredicted RBP13.08□□□□□ -0.32
XRN1-203ENST00000463916 SDC3O75056 442 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 ATXN1LP0C7T5 689 aaKnown RBP13.08□□□□□ -0.32
XRN1-203ENST00000463916 FTH1P19P0C7X4 201 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 GRK6P43250 576 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 MAGEA1P43355 309 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 ARRB1P49407 418 aaPredicted RBP13.08□□□□□ -0.32
XRN1-203ENST00000463916 GALNT2Q10471 571 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 HNRNPDQ14103 355 aaKnown RBP13.08□□□□□ -0.32
XRN1-203ENST00000463916 GRM3Q14832 879 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 FAM182AQ5T1J6 154 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 GOLPH3Q9H4A6 298 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 ATP13A3Q9H7F0 1226 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 NOD2Q9HC29 1040 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 MBNL1Q9NR56 388 aaKnown RBP13.08□□□□□ -0.32
XRN1-203ENST00000463916 GPR27Q9NS67 375 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 LCMT1Q9UIC8 334 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 COQ6Q9Y2Z9 468 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 PCDHGC4Q9Y5F7 938 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 DMXL2Q8TDJ6 3036 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 SOWAHDA6NJG2 315 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 MAGEC1O60732 1142 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 ITGAVP06756 1048 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 SERPINA4P29622 427 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 GARSP41250 739 aaKnown RBP13.08□□□□□ -0.32
XRN1-203ENST00000463916 BCL2L1Q07817 233 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 ZNF235Q14590 738 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 IHHQ14623 411 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 TMEM52BQ4KMG9 183 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 ZNF542PQ5EBM4 170 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 BRAT1Q6PJG6 821 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 MAP7D3Q8IWC1 876 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 SLC25A45Q8N413 288 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 CHCHD4Q8N4Q1 142 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 ASB12Q8WXK4 309 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 RNF157Q96PX1 679 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 MGME1Q9BQP7 344 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 SCNM1Q9BWG6 230 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 PCDHA13Q9Y5I0 950 aa13.08□□□□□ -0.32
XRN1-203ENST00000463916 ARID1BQ8NFD5 2236 aaPredicted RBP13.07□□□□□ -0.32
XRN1-203ENST00000463916 LRRK1Q38SD2 2015 aa13.07□□□□□ -0.32
XRN1-203ENST00000463916 A6NNZ2 444 aa13.07□□□□□ -0.32
XRN1-203ENST00000463916 TM7SF2O76062 418 aa13.07□□□□□ -0.32
XRN1-203ENST00000463916 COMTP21964 271 aa13.07□□□□□ -0.32
XRN1-203ENST00000463916 XPAP23025 273 aaPredicted RBP13.07□□□□□ -0.32
XRN1-203ENST00000463916 RENBPP51606 427 aa13.07□□□□□ -0.32
XRN1-203ENST00000463916 ZFYVE27Q5T4F4 411 aa13.07□□□□□ -0.32
XRN1-203ENST00000463916 MARC1Q5VT66 337 aa13.07□□□□□ -0.32
XRN1-203ENST00000463916 KYAT3Q6YP21 454 aaKnown RBP13.07□□□□□ -0.32
XRN1-203ENST00000463916 PTAR1Q7Z6K3 402 aaPredicted RBP13.07□□□□□ -0.32
XRN1-203ENST00000463916 TEX26Q8N6G2 289 aa13.07□□□□□ -0.32
XRN1-203ENST00000463916 EID2Q8N6I1 236 aa13.07□□□□□ -0.32
XRN1-203ENST00000463916 CXorf40AQ8TE69 158 aa13.07□□□□□ -0.32
XRN1-203ENST00000463916 PANX2Q96RD6 677 aa13.07□□□□□ -0.32
XRN1-203ENST00000463916 UCKL1Q9NWZ5 548 aa13.07□□□□□ -0.32
XRN1-203ENST00000463916 KLF15Q9UIH9 416 aa13.07□□□□□ -0.32
XRN1-203ENST00000463916 SALL4Q9UJQ4 1053 aa13.07□□□□□ -0.32
XRN1-203ENST00000463916 EPG5Q9HCE0 2579 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 LRRD1A4D1F6 860 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 RCCD1A6NED2 376 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 GOLGA8CPA6NN73 597 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 A8MX80 341 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 TNNT1P13805 278 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 FECHP22830 423 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 IGFALSP35858 605 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 MMP12P39900 470 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 MMP13P45452 471 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 LIG3P49916 1009 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 PFN3P60673 137 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 AP1S1P61966 158 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 RALGDSQ12967 914 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 FZD2Q14332 565 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 PTPRRQ15256 657 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 CFAP58Q5T655 872 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 RAB44Q7Z6P3 723 aaPredicted RBP13.06□□□□□ -0.32
XRN1-203ENST00000463916 CCDC170Q8IYT3 715 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 PLD5Q8N7P1 536 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 TP53I13Q8NBR0 393 aaPredicted RBP13.06□□□□□ -0.32
XRN1-203ENST00000463916 NUDCD1Q96RS6 583 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 CDC6Q99741 560 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 NT5MQ9NPB1 228 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 DTLQ9NZJ0 730 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 KLK13Q9UKR3 277 aa13.06□□□□□ -0.32
XRN1-203ENST00000463916 PNMA8BQ9ULN7 279 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms