RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 DPYSL2Q16555 572 aa20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 ZNF542PQ5EBM4 170 aa20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 BTN2A2Q8WVV5 523 aa20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 SPOCK2Q92563 424 aa20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 CELF6Q96J87 481 aaKnown RBP20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 EXOC2Q96KP1 924 aa20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 CAAP1Q9H8G2 361 aa20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 CBX8Q9HC52 389 aa20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 EVA1BQ9NVM1 165 aa20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 NCKIPSDQ9NZQ3 722 aa20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 CWC15Q9P013 229 aaKnown RBP20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 IPO11Q9UI26 975 aaKnown RBP20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 SALL4Q9UJQ4 1053 aa20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 CLCA2Q9UQC9 943 aa20.75■□□□□ 0.91
PDLIM4-205ENST00000463615 CACNA1GO43497 2377 aa20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 FFAR2O15552 330 aa20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 DAPK3O43293 454 aa20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 LZTS3O60299 673 aaPredicted RBP20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 BUB1BO60566 1050 aaPredicted RBP20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 PIGNO95427 931 aa20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 SKILP12757 684 aa20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 ITIH2P19823 946 aa20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 CLDN6P56747 220 aa20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 IL10RBQ08334 325 aa20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 ITPR1Q14643 2758 aa20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 BOLA3Q53S33 107 aa20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 LRRC73Q5JTD7 316 aa20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 CDCP2Q5VXM1 449 aa20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 ZCCHC8Q6NZY4 707 aaKnown RBP20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 NPWQ8N729 165 aa20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 ECHDC3Q96DC8 303 aa20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 RALYQ9UKM9 306 aaKnown RBP20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 ADAMTS20P59510 1910 aa20.74■□□□□ 0.91
PDLIM4-205ENST00000463615 AQP9O43315 295 aa20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 JUNDP17535 347 aa20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 RGRP47804 291 aa20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 PEX5P50542 639 aa20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 TPM4P67936 248 aa20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 FANCCQ00597 558 aa20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 PPP6R3Q5H9R7 873 aaPredicted RBP20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 MACC1Q6ZN28 852 aa20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 SRLQ86TD4 932 aa20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 VPS36Q86VN1 386 aa20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 NIPA2Q8N8Q9 360 aa20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 TSEN2Q8NCE0 465 aaKnown RBP20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 ZNF599Q96NL3 588 aa20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 PSKH2Q96QS6 385 aa20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 ZWILCHQ9H900 591 aa20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 PCDH12Q9NPG4 1184 aa20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 MBNL1Q9NR56 388 aaKnown RBP20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 SPASTQ9UBP0 616 aa20.73■□□□□ 0.91
PDLIM4-205ENST00000463615 MYLKQ15746 1914 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 CELSR3Q9NYQ7 3312 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 TMEM110-MUSTN1A8MSY1 372 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 OPA1O60313 960 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 PALMO75781 387 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 NEBLO76041 1014 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 MT-CO3P00414 261 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 XPAP23025 273 aaPredicted RBP20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 IL1R2P27930 398 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 SERPINA4P29622 427 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 MMP12P39900 470 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 THOP1P52888 689 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 ZBED6P86452 979 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 PIGHQ14442 188 aaPredicted RBP20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 ERAP2Q6P179 960 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 LUZP1Q86V48 1076 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 CAMK1DQ8IU85 385 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 ATP13A3Q9H7F0 1226 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 CAPN11Q9UMQ6 739 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 ATP8A1Q9Y2Q0 1164 aa20.72■□□□□ 0.91
PDLIM4-205ENST00000463615 SYCE3A1L190 88 aa20.71■□□□□ 0.91
PDLIM4-205ENST00000463615 SERPING1P05155 500 aa20.71■□□□□ 0.91
PDLIM4-205ENST00000463615 UBASH3AP57075 661 aa20.71■□□□□ 0.91
PDLIM4-205ENST00000463615 AP1S1P61966 158 aa20.71■□□□□ 0.91
PDLIM4-205ENST00000463615 LRRC14Q15048 493 aa20.71■□□□□ 0.91
PDLIM4-205ENST00000463615 IRF4Q15306 451 aa20.71■□□□□ 0.91
PDLIM4-205ENST00000463615 WSCD2Q2TBF2 565 aa20.71■□□□□ 0.91
PDLIM4-205ENST00000463615 TMCO4Q5TGY1 634 aa20.71■□□□□ 0.91
PDLIM4-205ENST00000463615 KDM7AQ6ZMT4 941 aa20.71■□□□□ 0.91
PDLIM4-205ENST00000463615 POLNQ7Z5Q5 900 aa20.71■□□□□ 0.91
PDLIM4-205ENST00000463615 ZSWIM9Q86XI8 627 aa20.71■□□□□ 0.91
PDLIM4-205ENST00000463615 TEKT4Q8WW24 435 aa20.71■□□□□ 0.91
PDLIM4-205ENST00000463615 WRAP53Q9BUR4 548 aaKnown RBP20.71■□□□□ 0.91
PDLIM4-205ENST00000463615 BOCQ9BWV1 1114 aa20.71■□□□□ 0.91
PDLIM4-205ENST00000463615 SP110Q9HB58 689 aa20.71■□□□□ 0.91
PDLIM4-205ENST00000463615 MYO1AQ9UBC5 1043 aa20.71■□□□□ 0.91
PDLIM4-205ENST00000463615 PNMA8BQ9ULN7 279 aaPredicted RBP20.71■□□□□ 0.91
PDLIM4-205ENST00000463615 LMO7DNF2Z398 122 aa20.7■□□□□ 0.9
PDLIM4-205ENST00000463615 H3BRJ5 948 aa20.7■□□□□ 0.9
PDLIM4-205ENST00000463615 TRAFD1O14545 582 aaPredicted RBP20.7■□□□□ 0.9
PDLIM4-205ENST00000463615 C6P13671 934 aa20.7■□□□□ 0.9
PDLIM4-205ENST00000463615 EIF4A3P38919 411 aaKnown RBP20.7■□□□□ 0.9
PDLIM4-205ENST00000463615 RENBPP51606 427 aa20.7■□□□□ 0.9
PDLIM4-205ENST00000463615 TDRD12Q587J7 1177 aaKnown RBP20.7■□□□□ 0.9
PDLIM4-205ENST00000463615 ARHGAP36Q6ZRI8 547 aa20.7■□□□□ 0.9
PDLIM4-205ENST00000463615 PHACTR4Q8IZ21 702 aa20.7■□□□□ 0.9
PDLIM4-205ENST00000463615 CINPQ9BW66 212 aaPredicted RBP20.7■□□□□ 0.9
PDLIM4-205ENST00000463615 SEPT3Q9UH03 358 aa20.7■□□□□ 0.9
PDLIM4-205ENST00000463615 APOBEC3BQ9UH17 382 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms