RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 GRIA1P42261 906 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 STT3AP46977 705 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 ATXN3P54252 364 aaPredicted RBP12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 GPR17Q13304 367 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 ADGRE1Q14246 886 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 PSMD5Q16401 504 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 ARL13BQ3SXY8 428 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 HEATR6Q6AI08 1181 aaKnown RBP12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 CDKL3Q8IVW4 592 aaPredicted RBP12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 SMYD1Q8NB12 490 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 IGSF21Q96ID5 467 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 QKIQ96PU8 341 aaKnown RBP eCLIP12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 TRDMT1O14717 391 aaKnown RBP12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 PAGE1O75459 146 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 F9P00740 461 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 ZFXP17010 805 aaPredicted RBP12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 ATF6P18850 670 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 CD97P48960 835 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 SCAPQ12770 1279 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 N4BP2L1Q5TBK1 243 aaPredicted RBP12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 KIAA1841Q6NSI8 718 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 UNC5AQ6ZN44 842 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 ERI1Q8IV48 349 aaKnown RBP12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 TRIML2Q8N7C3 387 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 TOP1MTQ969P6 601 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 TMIGD2Q96BF3 282 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 ARMC5Q96C12 935 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 C8orf48Q96LL4 319 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 SLC9A7Q96T83 725 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 MAN1C1Q9NR34 630 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 FAIMQ9NVQ4 179 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 SCML2Q9UQR0 700 aa12.12□□□□□ -0.47
TNRC6A-204ENST00000462400 ZNF487B1APH4 448 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 E9PBE3 544 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 AIM2O14862 343 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 KLHL41O60662 606 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 YWHAQP27348 245 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 WDR5P61964 334 aaKnown RBP12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 OLIG2Q13516 323 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 BTG3Q14201 252 aaPredicted RBP12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 FLOT2Q14254 428 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 ANKS3Q6ZW76 656 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 C14orf80Q86SX3 495 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 CAND1Q86VP6 1230 aaKnown RBP12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 PSTKQ8IV42 348 aaKnown RBP12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 BBS5Q8N3I7 341 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 HTR3CQ8WXA8 447 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 P2RY11Q96G91 374 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 CCT7Q99832 543 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 CCSER2Q9H7U1 834 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 NDFIP2Q9NV92 336 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 DNAJC28Q9NX36 388 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 MPP6Q9NZW5 540 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 PAK5Q9P286 719 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 ZBTB14O43829 449 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 SEC24AO95486 1093 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 TIMP1P01033 207 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 HAPLN1P10915 354 aaPredicted RBP12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 CD1EP15812 388 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 CA8P35219 290 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 NR2C2P49116 596 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 NUDT2P50583 147 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 MTA1Q13330 715 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 USP41Q3LFD5 358 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 C1orf53Q5VUE5 145 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 ARHGAP36Q6ZRI8 547 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 LPCAT2Q7L5N7 544 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 PATL1Q86TB9 770 aaKnown RBP12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 LILRA2Q8N149 483 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 CATSPER1Q8NEC5 780 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 SORT1Q99523 831 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 SMOC2Q9H3U7 446 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 RRN3Q9NYV6 651 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 RCOR3Q9P2K3 495 aaPredicted RBP12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 STK39Q9UEW8 545 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 RIMS3Q9UJD0 308 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 EMCNQ9ULC0 261 aa12.11□□□□□ -0.47
TNRC6A-204ENST00000462400 GREB1Q4ZG55 1949 aa12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 ZBBXA8MT70 800 aa12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 RNF103O00237 685 aa12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 CAPN15O75808 1086 aa12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 THRAP10827 490 aa12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 ARRB2P32121 409 aa12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 ELAVL2Q12926 359 aaKnown RBP12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 EIF4EBP2Q13542 120 aaPredicted RBP12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 C16orf72Q14CZ0 275 aa12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 SMAD1Q15797 465 aaKnown RBP12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 POTEHQ6S545 545 aa12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 MON1AQ86VX9 555 aa12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 C10orf107Q8IVU9 208 aa12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 SCML4Q8N228 414 aa12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 RNF148Q8N7C7 305 aa12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 ADCY4Q8NFM4 1077 aa12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 TSPAN14Q8NG11 270 aa12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 RTP4Q96DX8 246 aa12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 FCRL2Q96LA5 508 aaPredicted RBP12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 CLSTN3Q9BQT9 956 aa12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 RTKNQ9BST9 563 aa12.1□□□□□ -0.47
TNRC6A-204ENST00000462400 PFDN4Q9NQP4 134 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms