RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 NT5MQ9NPB1 228 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 SNX11Q9Y5W9 270 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 KNL1Q8NG31 2342 aa16■□□□□ 0.15
ERCC3-206ENST00000462306 DNAH14Q0VDD8 3507 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 hCG_1818297A0A087WSY0 165 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.99■□□□□ 0.15
ERCC3-206ENST00000462306 GOLGA6L3A6NEY3 463 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 IGLON5A6NGN9 336 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 UPK3BL1B0FP48 263 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 UPK3BL2E5RIL1 263 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 PRAMEF26H0Y7S4 382 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 NEMP1O14524 444 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 CST8O60676 142 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 CCNB1P14635 433 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 CTNNA2P26232 953 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 PEX5P50542 639 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 TFDP2Q14188 446 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 LLGL1Q15334 1064 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 HLA-BQ31612 363 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 UAP1L1Q3KQV9 507 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 TFDP3Q5H9I0 405 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 RALGPS1Q5JS13 557 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 ALG1LQ6GMV1 187 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 IL27RAQ6UWB1 636 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 ADAT2Q7Z6V5 191 aaKnown RBP15.99■□□□□ 0.15
ERCC3-206ENST00000462306 NT5DC3Q86UY8 548 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 ZSCAN30Q86W11 494 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 CCDC13Q8IYE1 715 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 MFSD2AQ8NA29 543 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 CCNYQ8ND76 341 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 SPOCK2Q92563 424 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 RBM41Q96IZ5 413 aaKnown RBP15.99■□□□□ 0.15
ERCC3-206ENST00000462306 ZNF830Q96NB3 372 aaPredicted RBP15.99■□□□□ 0.15
ERCC3-206ENST00000462306 GAREM1Q9H706 876 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 IL21RQ9HBE5 538 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 PCDH12Q9NPG4 1184 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 SCUBE2Q9NQ36 999 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 RBM22Q9NW64 420 aaKnown RBP eCLIP15.99■□□□□ 0.15
ERCC3-206ENST00000462306 AMACRQ9UHK6 382 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 CA5BQ9Y2D0 317 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 PCDHGC4Q9Y5F7 938 aa15.99■□□□□ 0.15
ERCC3-206ENST00000462306 CCDC66A2RUB6 948 aa15.98■□□□□ 0.15
ERCC3-206ENST00000462306 KCNK1O00180 336 aa15.98■□□□□ 0.15
ERCC3-206ENST00000462306 RIOK3O14730 519 aaKnown RBP15.98■□□□□ 0.15
ERCC3-206ENST00000462306 HTRA2O43464 458 aaPredicted RBP15.98■□□□□ 0.15
ERCC3-206ENST00000462306 OPHN1O60890 802 aa15.98■□□□□ 0.15
ERCC3-206ENST00000462306 PAK4O96013 591 aaPredicted RBP15.98■□□□□ 0.15
ERCC3-206ENST00000462306 HNRNPA2B1P22626 353 aaKnown RBP15.98■□□□□ 0.15
ERCC3-206ENST00000462306 CCZ1BP86790 482 aa15.98■□□□□ 0.15
ERCC3-206ENST00000462306 CCZ1P86791 482 aaPredicted RBP15.98■□□□□ 0.15
ERCC3-206ENST00000462306 IHHQ14623 411 aa15.98■□□□□ 0.15
ERCC3-206ENST00000462306 STAT4Q14765 748 aa15.98■□□□□ 0.15
ERCC3-206ENST00000462306 PDK1Q15118 436 aa15.98■□□□□ 0.15
ERCC3-206ENST00000462306 PPP2R5EQ16537 467 aa15.98■□□□□ 0.15
ERCC3-206ENST00000462306 TMEM52BQ4KMG9 183 aa15.98■□□□□ 0.15
ERCC3-206ENST00000462306 KAZNQ674X7 775 aa15.98■□□□□ 0.15
ERCC3-206ENST00000462306 IQCHQ86VS3 1027 aa15.98■□□□□ 0.15
ERCC3-206ENST00000462306 ASB12Q8WXK4 309 aa15.98■□□□□ 0.15
ERCC3-206ENST00000462306 ALG3Q92685 438 aa15.98■□□□□ 0.15
ERCC3-206ENST00000462306 MYOCQ99972 504 aa15.98■□□□□ 0.15
ERCC3-206ENST00000462306 TRPM6Q9BX84 2022 aa15.98■□□□□ 0.15
ERCC3-206ENST00000462306 FZD3Q9NPG1 666 aa15.98■□□□□ 0.15
ERCC3-206ENST00000462306 SAE1Q9UBE0 346 aaPredicted RBP15.98■□□□□ 0.15
ERCC3-206ENST00000462306 ASCC3Q8N3C0 2202 aaKnown RBP15.98■□□□□ 0.15
ERCC3-206ENST00000462306 TLR4O00206 839 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 KCNK3O14649 394 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 RAD51BO15315 384 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 MMP20O60882 483 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 SOCS5O75159 536 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 CER1O95813 267 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 JCHAINP01591 159 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 PRKCGP05129 697 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 HLA-DQB2P05538 268 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 CD59P13987 128 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 PECAM1P16284 738 aaPredicted RBP15.97■□□□□ 0.15
ERCC3-206ENST00000462306 TGM2P21980 687 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 XPAP23025 273 aaPredicted RBP15.97■□□□□ 0.15
ERCC3-206ENST00000462306 AKT2P31751 481 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 MMP12P39900 470 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 NR2C2P49116 596 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 C21orf59P57076 290 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 NXPH1P58417 271 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 COPS2P61201 443 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 IFI35P80217 286 aaPredicted RBP15.97■□□□□ 0.15
ERCC3-206ENST00000462306 ELP6Q0PNE2 266 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 TRAF2Q12933 501 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 ZBTB17Q13105 803 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 ZNF423Q2M1K9 1284 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 SLC45A4Q5BKX6 768 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 CFAP58Q5T655 872 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 CCDC50Q8IVM0 306 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 RNF10Q8N5U6 811 aaKnown RBP15.97■□□□□ 0.15
ERCC3-206ENST00000462306 CNTD1Q8N815 330 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 ARRDC2Q8TBH0 407 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 SKA1Q96BD8 255 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 LENG8Q96PV6 779 aaPredicted RBP15.97■□□□□ 0.15
ERCC3-206ENST00000462306 KLF6Q99612 283 aaPredicted RBP15.97■□□□□ 0.15
ERCC3-206ENST00000462306 IL12RB2Q99665 862 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 SEMA3CQ99985 751 aa15.97■□□□□ 0.15
ERCC3-206ENST00000462306 HERPUD2Q9BSE4 406 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms