RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 SLC6A17Q9H1V8 727 aa13.6□□□□□ -0.23
PBRM1-219ENST00000462207 LMAN1LQ9HAT1 526 aa13.6□□□□□ -0.23
PBRM1-219ENST00000462207 C2orf42Q9NWW7 574 aa13.6□□□□□ -0.23
PBRM1-219ENST00000462207 SUN2Q9UH99 717 aa13.6□□□□□ -0.23
PBRM1-219ENST00000462207 MRPS17Q9Y2R5 130 aaKnown RBP13.6□□□□□ -0.23
PBRM1-219ENST00000462207 CKAP5Q14008 2032 aa13.6□□□□□ -0.23
PBRM1-219ENST00000462207 LOC285095A0A1B0GVY8 99 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 NPC1O15118 1278 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 PSMD3O43242 534 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 HTRA2O43464 458 aaPredicted RBP13.59□□□□□ -0.23
PBRM1-219ENST00000462207 FZD6O60353 706 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 PGLSO95336 258 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 PIRTP0C851 137 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 TPH1P17752 444 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 PSMD8P48556 350 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 SESN2P58004 480 aaPredicted RBP13.59□□□□□ -0.23
PBRM1-219ENST00000462207 FAM193AP78312 1265 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 CRADDP78560 199 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 CDK16Q00536 496 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 RAD51Q06609 339 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 CAMK2GQ13555 558 aaPredicted RBP13.59□□□□□ -0.23
PBRM1-219ENST00000462207 SLC1A5Q15758 541 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 HP1BP3Q5SSJ5 553 aaPredicted RBP13.59□□□□□ -0.23
PBRM1-219ENST00000462207 DENND2CQ68D51 928 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 NAPEPLDQ6IQ20 393 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 GDPD4Q6W3E5 623 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 CCNI2Q6ZMN8 369 aaPredicted RBP13.59□□□□□ -0.23
PBRM1-219ENST00000462207 CCDC25Q86WR0 208 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 MMAAQ8IVH4 418 aaKnown RBP13.59□□□□□ -0.23
PBRM1-219ENST00000462207 ZCCHC9Q8N567 271 aaKnown RBP13.59□□□□□ -0.23
PBRM1-219ENST00000462207 KCNV2Q8TDN2 545 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 RUBCNQ92622 972 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 FMO2Q99518 471 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 WDR83Q9BRX9 315 aaKnown RBP13.59□□□□□ -0.23
PBRM1-219ENST00000462207 CPEB1Q9BZB8 566 aaKnown RBP13.59□□□□□ -0.23
PBRM1-219ENST00000462207 SUV39H2Q9H5I1 410 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 CD248Q9HCU0 757 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 CASS4Q9NQ75 786 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 RAB21Q9UL25 225 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 MYLKQ15746 1914 aa13.59□□□□□ -0.23
PBRM1-219ENST00000462207 A0A0U1RQS6 177 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 PLK4O00444 970 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 KPNA3O00505 521 aaPredicted RBP13.58□□□□□ -0.23
PBRM1-219ENST00000462207 STK25O00506 426 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 SYNCRIPO60506 623 aaKnown RBP13.58□□□□□ -0.23
PBRM1-219ENST00000462207 SOCS5O75159 536 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 NDST3O95803 873 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 PDGFBP01127 241 aaPredicted RBP13.58□□□□□ -0.23
PBRM1-219ENST00000462207 SLC8A1P32418 973 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 CAV1Q03135 178 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 FASTKD3Q14CZ7 662 aaKnown RBP13.58□□□□□ -0.23
PBRM1-219ENST00000462207 HIF1AQ16665 826 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 ARMC12Q5T9G4 340 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 SDE2Q6IQ49 451 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 LRRC8BQ6P9F7 803 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 TMEM92Q6UXU6 159 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 TRMT11Q7Z4G4 463 aaKnown RBP13.58□□□□□ -0.23
PBRM1-219ENST00000462207 MPP5Q8N3R9 675 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 PAF1Q8N7H5 531 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 DNAAF3Q8N9W5 541 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 FLCNQ8NFG4 579 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 PIP4K2CQ8TBX8 421 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 PPM1HQ9ULR3 514 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 MMP17Q9ULZ9 603 aa13.58□□□□□ -0.23
PBRM1-219ENST00000462207 IL1BP01584 269 aa13.58□□□□□ -0.24
PBRM1-219ENST00000462207 CTPS1P17812 591 aa13.58□□□□□ -0.24
PBRM1-219ENST00000462207 MGAT1P26572 445 aa13.58□□□□□ -0.24
PBRM1-219ENST00000462207 MAGEA3P43357 314 aa13.58□□□□□ -0.24
PBRM1-219ENST00000462207 COPAP53621 1224 aa13.58□□□□□ -0.24
PBRM1-219ENST00000462207 SEMG2Q02383 582 aa13.58□□□□□ -0.24
PBRM1-219ENST00000462207 DHX9Q08211 1270 aaKnown RBP13.58□□□□□ -0.24
PBRM1-219ENST00000462207 LRRC32Q14392 662 aa13.58□□□□□ -0.24
PBRM1-219ENST00000462207 QPCTQ16769 361 aa13.58□□□□□ -0.24
PBRM1-219ENST00000462207 BBS9Q3SYG4 887 aa13.58□□□□□ -0.24
PBRM1-219ENST00000462207 CERCAMQ5T4B2 595 aa13.58□□□□□ -0.24
PBRM1-219ENST00000462207 TRIM67Q6ZTA4 783 aa13.58□□□□□ -0.24
PBRM1-219ENST00000462207 PJA1Q8NG27 643 aa13.58□□□□□ -0.24
PBRM1-219ENST00000462207 PIH1D2Q8WWB5 315 aa13.58□□□□□ -0.24
PBRM1-219ENST00000462207 ARRDC3Q96B67 414 aa13.58□□□□□ -0.24
PBRM1-219ENST00000462207 RMDN1Q96DB5 314 aa13.58□□□□□ -0.24
PBRM1-219ENST00000462207 ECHDC3Q96DC8 303 aa13.58□□□□□ -0.24
PBRM1-219ENST00000462207 TRIM56Q9BRZ2 755 aaKnown RBP13.58□□□□□ -0.24
PBRM1-219ENST00000462207 CPP00450 1065 aa13.57□□□□□ -0.24
PBRM1-219ENST00000462207 PRNPP04156 253 aa13.57□□□□□ -0.24
PBRM1-219ENST00000462207 ALPIP09923 528 aa13.57□□□□□ -0.24
PBRM1-219ENST00000462207 HLA-DPA1P20036 260 aa13.57□□□□□ -0.24
PBRM1-219ENST00000462207 CA4P22748 312 aa13.57□□□□□ -0.24
PBRM1-219ENST00000462207 ARL4CP56559 192 aa13.57□□□□□ -0.24
PBRM1-219ENST00000462207 CDH17Q12864 832 aa13.57□□□□□ -0.24
PBRM1-219ENST00000462207 STARD3Q14849 445 aa13.57□□□□□ -0.24
PBRM1-219ENST00000462207 E2F5Q15329 346 aa13.57□□□□□ -0.24
PBRM1-219ENST00000462207 EOGTQ5NDL2 527 aa13.57□□□□□ -0.24
PBRM1-219ENST00000462207 CFAP58Q5T655 872 aa13.57□□□□□ -0.24
PBRM1-219ENST00000462207 UBAP2Q5T6F2 1119 aaKnown RBP13.57□□□□□ -0.24
PBRM1-219ENST00000462207 PARS2Q7L3T8 475 aaKnown RBP13.57□□□□□ -0.24
PBRM1-219ENST00000462207 LINC00523Q86TU6 105 aa13.57□□□□□ -0.24
PBRM1-219ENST00000462207 ZNF641Q96N77 438 aaPredicted RBP13.57□□□□□ -0.24
PBRM1-219ENST00000462207 MKRN2Q9H000 416 aaKnown RBP13.57□□□□□ -0.24
PBRM1-219ENST00000462207 RSPH9Q9H1X1 276 aaPredicted RBP13.57□□□□□ -0.24
PBRM1-219ENST00000462207 XAB2Q9HCS7 855 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms