RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 SLC47A2Q86VL8 602 aa10.98□□□□□ -0.65
CBX3-205ENST00000462165 FAM131BQ86XD5 332 aa10.98□□□□□ -0.65
CBX3-205ENST00000462165 DTX1Q86Y01 620 aa10.98□□□□□ -0.65
CBX3-205ENST00000462165 XYLT1Q86Y38 959 aa10.98□□□□□ -0.65
CBX3-205ENST00000462165 HID1Q8IV36 788 aa10.98□□□□□ -0.65
CBX3-205ENST00000462165 ZSCAN1Q8NBB4 408 aa10.98□□□□□ -0.65
CBX3-205ENST00000462165 GPR156Q8NFN8 814 aa10.98□□□□□ -0.65
CBX3-205ENST00000462165 CXorf40AQ8TE69 158 aa10.98□□□□□ -0.65
CBX3-205ENST00000462165 TSACCQ96A04 125 aaPredicted RBP10.98□□□□□ -0.65
CBX3-205ENST00000462165 C18orf8Q96DM3 657 aa10.98□□□□□ -0.65
CBX3-205ENST00000462165 RETREG1Q9H6L5 497 aa10.98□□□□□ -0.65
CBX3-205ENST00000462165 PLCB1Q9NQ66 1216 aa10.98□□□□□ -0.65
CBX3-205ENST00000462165 NDFIP2Q9NV92 336 aa10.98□□□□□ -0.65
CBX3-205ENST00000462165 SIRPGQ9P1W8 387 aa10.98□□□□□ -0.65
CBX3-205ENST00000462165 APPL1Q9UKG1 709 aa10.98□□□□□ -0.65
CBX3-205ENST00000462165 GPR34Q9UPC5 381 aa10.98□□□□□ -0.65
CBX3-205ENST00000462165 LOXL2Q9Y4K0 774 aa10.98□□□□□ -0.65
CBX3-205ENST00000462165 PCDHGA4Q9Y5G9 962 aa10.98□□□□□ -0.65
CBX3-205ENST00000462165 ARHGEF17Q96PE2 2063 aaPredicted RBP10.97□□□□□ -0.65
CBX3-205ENST00000462165 A0A1W2PQC6 194 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 GTPBP10A4D1E9 387 aaKnown RBP10.97□□□□□ -0.65
CBX3-205ENST00000462165 PPFIA2O75334 1257 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 PNLIPP16233 465 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 GLB1P16278 677 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 ITIH1P19827 911 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 PON1P27169 355 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 ETV5P41161 510 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 MAPKAPK2P49137 400 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 NFATC4Q14934 902 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 ALG11Q2TAA5 492 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 LRRC73Q5JTD7 316 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 MANEALQ5VSG8 457 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 TRNP1Q6NT89 227 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 ENPP7Q6UWV6 458 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 ARCQ7LC44 396 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 VASH2Q86V25 355 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 NLRP14Q86W24 1093 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 TMEM35BQ8NCS4 154 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 SLC25A18Q9H1K4 315 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 MAGEH1Q9H213 219 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 TMEM248Q9NWD8 314 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 GEMIN8Q9NWZ8 242 aaKnown RBP10.97□□□□□ -0.65
CBX3-205ENST00000462165 DKK3Q9UBP4 350 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 AJAP1Q9UKB5 411 aaPredicted RBP10.97□□□□□ -0.65
CBX3-205ENST00000462165 HPCAL4Q9UM19 191 aa10.97□□□□□ -0.65
CBX3-205ENST00000462165 SDK2Q58EX2 2172 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 PRAMEF33A0A0G2JMD5 474 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 ZSCAN5CA6NGD5 496 aaPredicted RBP10.96□□□□□ -0.65
CBX3-205ENST00000462165 FOXN3O00409 490 aaPredicted RBP10.96□□□□□ -0.65
CBX3-205ENST00000462165 PRAMEF10O60809 474 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 TIMP2P16035 220 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 RHOQP17081 205 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 WT1P19544 449 aaPredicted RBP10.96□□□□□ -0.65
CBX3-205ENST00000462165 ITIH2P19823 946 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 CD82P27701 267 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 HTR1BP28222 390 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 BPIFB4P59827 614 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 SRP54P61011 504 aaKnown RBP10.96□□□□□ -0.65
CBX3-205ENST00000462165 TLE1Q04724 770 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 RAD51Q06609 339 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 LRRC14Q15048 493 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 AGERQ15109 404 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 WSCD2Q2TBF2 565 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 TMEM52BQ4KMG9 183 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 ATXN7L2Q5T6C5 722 aaPredicted RBP10.96□□□□□ -0.65
CBX3-205ENST00000462165 OGFOD3Q6PK18 319 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 ZFAND4Q86XD8 727 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 LURAP1LQ8IV03 231 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 CCNJLQ8IV13 435 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 SLITRK4Q8IW52 837 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 FAM71AQ8IYT1 594 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 ATL2Q8NHH9 583 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 HTR3CQ8WXA8 447 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 USP7Q93009 1102 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 CFAP57Q96MR6 1250 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 GDAP1L1Q96MZ0 367 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 RBM15Q96T37 977 aaKnown RBP eCLIP10.96□□□□□ -0.65
CBX3-205ENST00000462165 CMKLR1Q99788 373 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 APOOQ9BUR5 198 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 TTYH3Q9C0H2 523 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 B3GNT4Q9C0J1 378 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 SIX2Q9NPC8 291 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 FOXJ2Q9P0K8 574 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 OR12D3Q9UGF7 316 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 DNAI1Q9UI46 699 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 TMEM59LQ9UK28 342 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 DNAJC12Q9UKB3 198 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 COQ6Q9Y2Z9 468 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 MFHAS1Q9Y4C4 1052 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 PCDHB11Q9Y5F2 797 aa10.96□□□□□ -0.65
CBX3-205ENST00000462165 C9orf172C9J069 976 aa10.95□□□□□ -0.66
CBX3-205ENST00000462165 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.95□□□□□ -0.66
CBX3-205ENST00000462165 BIN1O00499 593 aa10.95□□□□□ -0.66
CBX3-205ENST00000462165 KDELR3O43731 214 aa10.95□□□□□ -0.66
CBX3-205ENST00000462165 RAMP2O60895 175 aa10.95□□□□□ -0.66
CBX3-205ENST00000462165 TMCC1O94876 653 aa10.95□□□□□ -0.66
CBX3-205ENST00000462165 IGSF6O95976 241 aa10.95□□□□□ -0.66
CBX3-205ENST00000462165 TNFP01375 233 aa10.95□□□□□ -0.66
CBX3-205ENST00000462165 NTRK1P04629 796 aa10.95□□□□□ -0.66
CBX3-205ENST00000462165 PNMA6AP0CW24 399 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms