RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 TARDBPQ13148 414 aaKnown RBP eCLIP19.13■□□□□ 0.65
VARS-220ENST00000461874 RFTN1Q14699 578 aaPredicted RBP19.13■□□□□ 0.65
VARS-220ENST00000461874 DPYSL2Q16555 572 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 BOLA3Q53S33 107 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 BRAT1Q6PJG6 821 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 ARHGAP36Q6ZRI8 547 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 SRLQ86TD4 932 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 CAMK1DQ8IU85 385 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 LZTR1Q8N653 840 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 FAM181AQ8N9Y4 354 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 TSEN2Q8NCE0 465 aaKnown RBP19.13■□□□□ 0.65
VARS-220ENST00000461874 ZNF548Q8NEK5 533 aaPredicted RBP19.13■□□□□ 0.65
VARS-220ENST00000461874 CPLX3Q8WVH0 158 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 IQCDQ96DY2 449 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 TUBGCP5Q96RT8 1024 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 DUSP23Q9BVJ7 150 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 SP110Q9HB58 689 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 PCDH12Q9NPG4 1184 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 MBNL1Q9NR56 388 aaKnown RBP19.13■□□□□ 0.65
VARS-220ENST00000461874 RAXQ9Y2V3 346 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 CSNK1G3Q9Y6M4 447 aa19.13■□□□□ 0.65
VARS-220ENST00000461874 TDRD6O60522 2096 aaKnown RBP19.12■□□□□ 0.65
VARS-220ENST00000461874 GOLGA6L19H0YKK7 550 aa19.12■□□□□ 0.65
VARS-220ENST00000461874 K7ESM1 405 aa19.12■□□□□ 0.65
VARS-220ENST00000461874 NEBLO76041 1014 aa19.12■□□□□ 0.65
VARS-220ENST00000461874 TCF4P15884 667 aa19.12■□□□□ 0.65
VARS-220ENST00000461874 JUNDP17535 347 aa19.12■□□□□ 0.65
VARS-220ENST00000461874 YPEL5P62699 121 aa19.12■□□□□ 0.65
VARS-220ENST00000461874 INSM1Q01101 510 aaPredicted RBP19.12■□□□□ 0.65
VARS-220ENST00000461874 IL10RBQ08334 325 aa19.12■□□□□ 0.65
VARS-220ENST00000461874 PIGHQ14442 188 aaPredicted RBP19.12■□□□□ 0.65
VARS-220ENST00000461874 TP53INP2Q8IXH6 220 aa19.12■□□□□ 0.65
VARS-220ENST00000461874 CACTIN-AS1Q8N1I8 211 aa19.12■□□□□ 0.65
VARS-220ENST00000461874 TP53I13Q8NBR0 393 aaPredicted RBP19.12■□□□□ 0.65
VARS-220ENST00000461874 APOLD1Q96LR9 279 aa19.12■□□□□ 0.65
VARS-220ENST00000461874 THAP2Q9H0W7 228 aa19.12■□□□□ 0.65
VARS-220ENST00000461874 LUC7L2Q9Y383 392 aaKnown RBP19.12■□□□□ 0.65
VARS-220ENST00000461874 GPSM3Q9Y4H4 160 aa19.12■□□□□ 0.65
VARS-220ENST00000461874 LY6G6EA0A0G2JKS1 128 aa19.11■□□□□ 0.65
VARS-220ENST00000461874 H3BRJ5 948 aa19.11■□□□□ 0.65
VARS-220ENST00000461874 TOR1BO14657 336 aa19.11■□□□□ 0.65
VARS-220ENST00000461874 RIOK3O14730 519 aaKnown RBP19.11■□□□□ 0.65
VARS-220ENST00000461874 ARL4AP40617 200 aa19.11■□□□□ 0.65
VARS-220ENST00000461874 THOP1P52888 689 aa19.11■□□□□ 0.65
VARS-220ENST00000461874 NSUN2Q08J23 767 aaKnown RBP eCLIP19.11■□□□□ 0.65
VARS-220ENST00000461874 PTK2BQ14289 1009 aa19.11■□□□□ 0.65
VARS-220ENST00000461874 SMTNL2Q2TAL5 461 aa19.11■□□□□ 0.65
VARS-220ENST00000461874 CFAP58Q5T655 872 aa19.11■□□□□ 0.65
VARS-220ENST00000461874 ERAP2Q6P179 960 aa19.11■□□□□ 0.65
VARS-220ENST00000461874 POLNQ7Z5Q5 900 aa19.11■□□□□ 0.65
VARS-220ENST00000461874 ZSWIM9Q86XI8 627 aa19.11■□□□□ 0.65
VARS-220ENST00000461874 NIPA2Q8N8Q9 360 aa19.11■□□□□ 0.65
VARS-220ENST00000461874 CINPQ9BW66 212 aaPredicted RBP19.11■□□□□ 0.65
VARS-220ENST00000461874 ATP13A3Q9H7F0 1226 aa19.11■□□□□ 0.65
VARS-220ENST00000461874 USP29Q9HBJ7 922 aa19.11■□□□□ 0.65
VARS-220ENST00000461874 IFNKQ9P0W0 207 aa19.11■□□□□ 0.65
VARS-220ENST00000461874 U3KQA8 63 aa19.11■□□□□ 0.65
VARS-220ENST00000461874 A0A087X0T9 212 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 AQP9O43315 295 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 CYP1A2P05177 515 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 FAM228BP0C875 321 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 RARAP10276 462 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 MYF5P13349 255 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 AMPD1P23109 780 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 SERPINA4P29622 427 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 MMP12P39900 470 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 LRRC14Q15048 493 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 IRF4Q15306 451 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 WSCD2Q2TBF2 565 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 DCBLD1Q8N8Z6 715 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 LMX1AQ8TE12 382 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 BTN2A2Q8WVV5 523 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 TEKT4Q8WW24 435 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 HSPH1Q92598 858 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 ECHDC3Q96DC8 303 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 NXPE2Q96DL1 559 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 PSKH2Q96QS6 385 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.1■□□□□ 0.65
VARS-220ENST00000461874 ETNK2Q9NVF9 386 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 SEPT3Q9UH03 358 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 IP6K2Q9UHH9 426 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 PNMA8BQ9ULN7 279 aaPredicted RBP19.1■□□□□ 0.65
VARS-220ENST00000461874 CLCA2Q9UQC9 943 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 ATP8A1Q9Y2Q0 1164 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 COQ6Q9Y2Z9 468 aa19.1■□□□□ 0.65
VARS-220ENST00000461874 TPP1O14773 563 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 MUSKO15146 869 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 GYPCP04921 128 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 C6P13671 934 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 PTMSP20962 102 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 EIF4A3P38919 411 aaKnown RBP19.09■□□□□ 0.65
VARS-220ENST00000461874 LIG3P49916 1009 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 DUSP3P51452 185 aaPredicted RBP19.09■□□□□ 0.65
VARS-220ENST00000461874 NFKBIBQ15653 356 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 ZSCAN23Q3MJ62 389 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 TMCO4Q5TGY1 634 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 TXNRD3NBQ6F5E7 133 aa19.09■□□□□ 0.65
VARS-220ENST00000461874 ZCCHC8Q6NZY4 707 aaKnown RBP19.09■□□□□ 0.65
VARS-220ENST00000461874 ALKBH5Q6P6C2 394 aaKnown RBP19.09■□□□□ 0.65
VARS-220ENST00000461874 TMCO3Q6UWJ1 677 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms