RNA–Protein interactions for RNA: ENST00000461679.1

C9orf72-204, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 5

Gene C9orf72, Length 862 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-204ENST00000461679 PCNX2A6NKB5 2137 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 SHROOM3Q8TF72 1996 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 TSPAN11A1L157 253 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 A8MX80 341 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 FFAR2O15552 330 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 MAN1A1P33908 653 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 RXRGP48443 463 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 CSNK1DP48730 415 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 MAXP61244 160 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 PDE1CQ14123 709 aaPredicted RBP13.4□□□□□ -0.26
C9orf72-204ENST00000461679 PDK2Q15119 407 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 UGP2Q16851 508 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 ERAP2Q6P179 960 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 BRAT1Q6PJG6 821 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 KYAT3Q6YP21 454 aaKnown RBP13.4□□□□□ -0.26
C9orf72-204ENST00000461679 ABI3BPQ7Z7G0 1075 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 GLRX5Q86SX6 157 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 GAS2L3Q86XJ1 694 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 MAP7D3Q8IWC1 876 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 RHOT2Q8IXI1 618 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 BBS5Q8N3I7 341 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 PGBD5Q8N414 524 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 FAM71BQ8TC56 605 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 PDCD6IPQ8WUM4 868 aaKnown RBP13.4□□□□□ -0.26
C9orf72-204ENST00000461679 RFFLQ8WZ73 363 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 RAPGEF5Q92565 580 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 CNDP2Q96KP4 475 aaKnown RBP13.4□□□□□ -0.26
C9orf72-204ENST00000461679 NSMCE3Q96MG7 304 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 PSKH2Q96QS6 385 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 KLF6Q99612 283 aaPredicted RBP13.4□□□□□ -0.26
C9orf72-204ENST00000461679 ZNF670Q9BS34 389 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 SCUBE2Q9NQ36 999 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 UCKL1Q9NWZ5 548 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 DNAJC28Q9NX36 388 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 TFR2Q9UP52 801 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 WASF3Q9UPY6 502 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 HYOU1Q9Y4L1 999 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 HS3ST3A1Q9Y663 406 aa13.4□□□□□ -0.26
C9orf72-204ENST00000461679 LRRD1A4D1F6 860 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 RIOK3O14730 519 aaKnown RBP13.39□□□□□ -0.27
C9orf72-204ENST00000461679 TNFSF14O43557 240 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 TRIM16O95361 564 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 LDOC1O95751 146 aaPredicted RBP13.39□□□□□ -0.27
C9orf72-204ENST00000461679 PEX11BO96011 259 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 C6P13671 934 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 KDELR1P24390 212 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 IGFALSP35858 605 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 MMP13P45452 471 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 LIG3P49916 1009 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 AP1S1P61966 158 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 ITKQ08881 620 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 NSUN2Q08J23 767 aaKnown RBP eCLIP13.39□□□□□ -0.27
C9orf72-204ENST00000461679 DNAJC3Q13217 504 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 TMEM52BQ4KMG9 183 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 TPRG1LQ5T0D9 272 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 MARC1Q5VT66 337 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 ZSCAN30Q86W11 494 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 HCAR2Q8TDS4 363 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 LENG8Q96PV6 779 aaPredicted RBP13.39□□□□□ -0.27
C9orf72-204ENST00000461679 NT5MQ9NPB1 228 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 MBNL1Q9NR56 388 aaKnown RBP13.39□□□□□ -0.27
C9orf72-204ENST00000461679 TOR4AQ9NXH8 423 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 ATP8A1Q9Y2Q0 1164 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 TTLL3Q9Y4R7 772 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 PCDHGC4Q9Y5F7 938 aa13.39□□□□□ -0.27
C9orf72-204ENST00000461679 C1QTNF9BB2RNN3 333 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 ENC1O14682 589 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 LZTS3O60299 673 aaPredicted RBP13.38□□□□□ -0.27
C9orf72-204ENST00000461679 KRT1P04264 644 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 C1QTNF9P0C862 333 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 MMP12P39900 470 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 GARSP41250 739 aaKnown RBP13.38□□□□□ -0.27
C9orf72-204ENST00000461679 ARHGAP25P42331 645 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 MAGEA1P43355 309 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 NOP2P46087 812 aaKnown RBP13.38□□□□□ -0.27
C9orf72-204ENST00000461679 RABIFP47224 123 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 SUOXP51687 545 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 THOP1P52888 689 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 GBE1Q04446 702 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 GALNT2Q10471 571 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 FZD2Q14332 565 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 PAFAH1B3Q15102 231 aaKnown RBP13.38□□□□□ -0.27
C9orf72-204ENST00000461679 IRF4Q15306 451 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 ODF2Q5BJF6 829 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 KANSL1Q7Z3B3 1105 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 RAB44Q7Z6P3 723 aaPredicted RBP13.38□□□□□ -0.27
C9orf72-204ENST00000461679 PQLC3Q8N755 202 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 TP53I13Q8NBR0 393 aaPredicted RBP13.38□□□□□ -0.27
C9orf72-204ENST00000461679 DENND6BQ8NEG7 585 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 ASB12Q8WXK4 309 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 ADAMTS14Q8WXS8 1223 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 CENPTQ96BT3 561 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 MRFAP1L1Q96HT8 127 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 C1QTNF7Q9BXJ2 289 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 NOD2Q9HC29 1040 aa13.38□□□□□ -0.27
C9orf72-204ENST00000461679 CABIN1Q9Y6J0 2220 aa13.37□□□□□ -0.27
C9orf72-204ENST00000461679 SPTY2D1-AS1A0A0U1RR47 76 aa13.37□□□□□ -0.27
C9orf72-204ENST00000461679 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.37□□□□□ -0.27
C9orf72-204ENST00000461679 TRAFD1O14545 582 aaPredicted RBP13.37□□□□□ -0.27
C9orf72-204ENST00000461679 SPOPO43791 374 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms