RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-208	ENST00000461578	C16orf72	Q14CZ0	275 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	LRRC14	Q15048	493 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	MAP9	Q49MG5	647 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	BORA	Q6PGQ7	559 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	TRIM65	Q6PJ69	517 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	GDPD4	Q6W3E5	623 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	SPRED1	Q7Z699	444 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	FAM131B	Q86XD5	332 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	PLPP6	Q8IY26	295 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	GPR156	Q8NFN8	814 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	OR6C4	Q8NGE1	309 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	SPATA20	Q8TB22	786 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	ARHGEF2	Q92974	986 aa	Known RBP	13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	VOPP1	Q96AW1	172 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	PGAP3	Q96FM1	320 aa	Predicted RBP	13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	PDXP	Q96GD0	296 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	OSBPL1A	Q9BXW6	950 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	ADNP	Q9H2P0	1102 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	SEMA6C	Q9H3T2	930 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	DNAI1	Q9UI46	699 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	LRRK1	Q38SD2	2015 aa		13.9	□□□□□ -0.18
PABPC4-208	ENST00000461578	SDK2	Q58EX2	2172 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578		B4DGG1	531 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	PCCB	P05166	539 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	PNMA6A	P0CW24	399 aa	Predicted RBP	13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	CCL4	P13236	92 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	GLB1	P16278	677 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	XPA	P23025	273 aa	Predicted RBP	13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	FLT3	P36888	993 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	PEX5	P50542	639 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	POLE2	P56282	527 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	FOXK1	P85037	733 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	PTK2	Q05397	1052 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	KCNAB2	Q13303	367 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	ARHGEF7	Q14155	803 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	INPP5A	Q14642	412 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	WSCD2	Q2TBF2	565 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	SLC25A52	Q3SY17	297 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	CERCAM	Q5T4B2	595 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	RWDD4	Q6NW29	188 aa	Known RBP	13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	TAF8	Q7Z7C8	310 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	ZNF354C	Q86Y25	554 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	CREBRF	Q8IUR6	639 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	SLITRK4	Q8IW52	837 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	FAM46D	Q8NEK8	389 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	NT5C3B	Q969T7	300 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	TMEM159	Q96B96	161 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	CFAP57	Q96MR6	1250 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	HAPLN3	Q96S86	360 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	APOO	Q9BUR5	198 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	SLC12A9	Q9BXP2	914 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	RDH14	Q9HBH5	336 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	LRIT1	Q9P2V4	623 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	APPL1	Q9UKG1	709 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	MAN1B1	Q9UKM7	699 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	ANKRD36	A6QL64	1941 aa		13.89	□□□□□ -0.19
PABPC4-208	ENST00000461578	BICDL2	A1A5D9	508 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	TMEM110-MUSTN1	A8MSY1	372 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	GOLGA8S	H3BPF8	625 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	STMND1	H3BQB6	276 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	TNF	P01375	233 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	TIMP2	P16035	220 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	CD82	P27701	267 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	ATP1A2	P50993	1020 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	GEMIN4	P57678	1058 aa	Known RBP	13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	AMZ1	Q400G9	498 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	C2CD6	Q53TS8	623 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	TMEM164	Q5U3C3	297 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	TRNP1	Q6NT89	227 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	SLC47A2	Q86VL8	602 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	ZDHHC17	Q8IUH5	632 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	RCBTB1	Q8NDN9	531 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	SHC3	Q92529	594 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	PMEPA1	Q969W9	287 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	WDR92	Q96MX6	357 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	GDAP1L1	Q96MZ0	367 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	RBM15	Q96T37	977 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	AKAP7	Q9P0M2	348 aa	Predicted RBP	13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	HPCAL4	Q9UM19	191 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	MAN2B2	Q9Y2E5	1009 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	RELN	P78509	3460 aa		13.88	□□□□□ -0.19
PABPC4-208	ENST00000461578	PPP1R3G	B7ZBB8	358 aa		13.87	□□□□□ -0.19
PABPC4-208	ENST00000461578	TMCC1	O94876	653 aa		13.87	□□□□□ -0.19
PABPC4-208	ENST00000461578	GNA14	O95837	355 aa		13.87	□□□□□ -0.19
PABPC4-208	ENST00000461578	ETFB	P38117	255 aa		13.87	□□□□□ -0.19
PABPC4-208	ENST00000461578	MARS	P56192	900 aa	Known RBP	13.87	□□□□□ -0.19
PABPC4-208	ENST00000461578	RAD51	Q06609	339 aa		13.87	□□□□□ -0.19
PABPC4-208	ENST00000461578	TMEM52B	Q4KMG9	183 aa		13.87	□□□□□ -0.19
PABPC4-208	ENST00000461578	C14orf28	Q4W4Y0	310 aa		13.87	□□□□□ -0.19
PABPC4-208	ENST00000461578	C4orf17	Q53FE4	359 aa		13.87	□□□□□ -0.19
PABPC4-208	ENST00000461578	RAB6C	Q53S08	254 aa		13.87	□□□□□ -0.19
PABPC4-208	ENST00000461578	IL22RA1	Q8N6P7	574 aa		13.87	□□□□□ -0.19
PABPC4-208	ENST00000461578	OR1E3	Q8WZA6	343 aa		13.87	□□□□□ -0.19
PABPC4-208	ENST00000461578	NKD1	Q969G9	470 aa		13.87	□□□□□ -0.19
PABPC4-208	ENST00000461578	FAM81B	Q96LP2	452 aa		13.87	□□□□□ -0.19
PABPC4-208	ENST00000461578	RAB6C	Q9H0N0	254 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms