RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 SCYL1Q96KG9 808 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 UBA2Q9UBT2 640 aaPredicted RBP20.37■□□□□ 0.85
CCM2-203ENST00000461377 ACTL7AQ9Y615 435 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 LTBP2Q14767 1821 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.37■□□□□ 0.85
CCM2-203ENST00000461377 HSPA4LO95757 839 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 SERPINF2P08697 491 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 GLRBP48167 497 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 IDH3AP50213 366 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 MNAT1P51948 309 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 ALDH18A1P54886 795 aaKnown RBP20.37■□□□□ 0.85
CCM2-203ENST00000461377 DEFB103AP81534 67 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 LAMB3Q13751 1172 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 TSNAXIP1Q2TAA8 658 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 RBM20Q5T481 1227 aaKnown RBP20.37■□□□□ 0.85
CCM2-203ENST00000461377 ADGRF1Q5T601 910 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 LIPMQ5VYY2 423 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 SETD3Q86TU7 594 aaPredicted RBP20.37■□□□□ 0.85
CCM2-203ENST00000461377 CILP2Q8IUL8 1156 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 LMNTD2Q8IXW0 634 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 FAM13CQ8NE31 585 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 PEX13Q92968 403 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 NXNL1Q96CM4 212 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 PSKH2Q96QS6 385 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 TRIB3Q96RU7 358 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 SPON2Q9BUD6 331 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 SORCS3Q9UPU3 1222 aa20.37■□□□□ 0.85
CCM2-203ENST00000461377 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.36■□□□□ 0.85
CCM2-203ENST00000461377 A0A1B0GVM2 712 aa20.36■□□□□ 0.85
CCM2-203ENST00000461377 TCAF2A6NFQ2 919 aa20.36■□□□□ 0.85
CCM2-203ENST00000461377 RHOCP08134 193 aa20.36■□□□□ 0.85
CCM2-203ENST00000461377 CLTBP09497 229 aa20.36■□□□□ 0.85
CCM2-203ENST00000461377 IRF1P10914 325 aa20.36■□□□□ 0.85
CCM2-203ENST00000461377 LAG3P18627 525 aa20.36■□□□□ 0.85
CCM2-203ENST00000461377 TWF1Q12792 350 aa20.36■□□□□ 0.85
CCM2-203ENST00000461377 ZNF177Q13360 481 aaPredicted RBP20.36■□□□□ 0.85
CCM2-203ENST00000461377 RFTN1Q14699 578 aaPredicted RBP20.36■□□□□ 0.85
CCM2-203ENST00000461377 FAM117BQ6P1L5 589 aa20.36■□□□□ 0.85
CCM2-203ENST00000461377 RINLQ6ZS11 566 aa20.36■□□□□ 0.85
CCM2-203ENST00000461377 DDX53Q86TM3 631 aaKnown RBP20.36■□□□□ 0.85
CCM2-203ENST00000461377 HDAC10Q969S8 669 aa20.36■□□□□ 0.85
CCM2-203ENST00000461377 CINPQ9BW66 212 aaPredicted RBP20.36■□□□□ 0.85
CCM2-203ENST00000461377 CADM1Q9BY67 442 aaKnown RBP20.36■□□□□ 0.85
CCM2-203ENST00000461377 CDH19Q9H159 772 aa20.36■□□□□ 0.85
CCM2-203ENST00000461377 SPG21Q9NZD8 308 aa20.36■□□□□ 0.85
CCM2-203ENST00000461377 XPR1Q9UBH6 696 aa20.36■□□□□ 0.85
CCM2-203ENST00000461377 KCTD3Q9Y597 815 aa20.36■□□□□ 0.85
CCM2-203ENST00000461377 URODP06132 367 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 GLDCP23378 1020 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 SLC8A1P32418 973 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 SLC12A2P55011 1212 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 PTAR1Q7Z6K3 402 aaPredicted RBP20.35■□□□□ 0.85
CCM2-203ENST00000461377 CMTR2Q8IYT2 770 aaKnown RBP20.35■□□□□ 0.85
CCM2-203ENST00000461377 ZNF781Q8N8C0 355 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.35■□□□□ 0.85
CCM2-203ENST00000461377 RIMKLBQ9ULI2 386 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 RPL26L1Q9UNX3 145 aaKnown RBP20.35■□□□□ 0.85
CCM2-203ENST00000461377 APOBEC2Q9Y235 224 aaKnown RBP20.35■□□□□ 0.85
CCM2-203ENST00000461377 TBC1D30Q9Y2I9 924 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 NDST3O95803 873 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 PRAMEP78395 509 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 GALNT3Q14435 633 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 DNAJB7Q7Z6W7 309 aaPredicted RBP20.35■□□□□ 0.85
CCM2-203ENST00000461377 TMEM150AQ86TG1 271 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 TCEAL8Q8IYN2 117 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 OR6P1Q8NGX9 317 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 AGAP11Q8TF27 550 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 NDNQ99608 321 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 OLFM1Q99784 485 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 DDX50Q9BQ39 737 aaKnown RBP20.35■□□□□ 0.85
CCM2-203ENST00000461377 DRC3Q9H069 523 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 TAS2R1Q9NYW7 299 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 STOML2Q9UJZ1 356 aa20.35■□□□□ 0.85
CCM2-203ENST00000461377 CCL22O00626 93 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 PRRG1O14668 218 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 GYG2O15488 501 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 GSC2O15499 205 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 TSPAN3O60637 253 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 ENO1P06733 434 aaKnown RBP20.34■□□□□ 0.85
CCM2-203ENST00000461377 MYL4P12829 197 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 RGRP47804 291 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 KPNA2P52292 529 aaKnown RBP20.34■□□□□ 0.85
CCM2-203ENST00000461377 BRSK1Q8TDC3 778 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 BLOC1S5Q8TDH9 187 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 ZFRQ96KR1 1074 aaKnown RBP20.34■□□□□ 0.85
CCM2-203ENST00000461377 NSMCE3Q96MG7 304 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 MRPL46Q9H2W6 279 aaKnown RBP20.34■□□□□ 0.85
CCM2-203ENST00000461377 IGSF5Q9NSI5 407 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 MARCH4Q9P2E8 410 aaPredicted RBP20.34■□□□□ 0.85
CCM2-203ENST00000461377 TAGLN3Q9UI15 199 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 INSL5Q9Y5Q6 135 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 DLX3O60479 287 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 S1PR4O95977 384 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 AOC1P19801 751 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 CR2P20023 1033 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 ELF1P32519 619 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 GRIA4P48058 902 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 UBAP2LQ14157 1087 aaKnown RBP20.34■□□□□ 0.85
CCM2-203ENST00000461377 HECTD2Q5U5R9 776 aa20.34■□□□□ 0.85
CCM2-203ENST00000461377 CXorf57Q6NSI4 855 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms