RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 RPL26L1Q9UNX3 145 aaKnown RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 AK5Q9Y6K8 562 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 LOC110117498-PIK3R3F6TDL0 507 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 FOSL2P15408 326 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 CDH5P33151 784 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 IGFALSP35858 605 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 PDX1P52945 283 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 BACE1P56817 501 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 ATP6V0D1P61421 351 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 LSM3P62310 102 aaKnown RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 RPL38P63173 70 aaKnown RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 CYP4F2P78329 520 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 CYP4F3Q08477 520 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 TYSND1Q2T9J0 566 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 AAGABQ6PD74 315 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 ZPBP2Q6X784 338 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 APTXQ7Z2E3 356 aaKnown RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 CKAP2Q8WWK9 683 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 TATDN2Q93075 761 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 LENG1Q96BZ8 264 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 PNMA5Q96PV4 448 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 SLC4A9Q96Q91 983 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 ATP13A3Q9H7F0 1226 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 EXD2Q9NVH0 621 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 MAGEL2Q9UJ55 1249 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 PRPF19Q9UMS4 504 aaKnown RBP9.05□□□□□ -0.96
BRCA1-205ENST00000461221 DMTF1Q9Y222 760 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 PPP2R3BQ9Y5P8 575 aa9.05□□□□□ -0.96
BRCA1-205ENST00000461221 MAP3K4Q9Y6R4 1608 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 ABHD14A-ACY1A0A1B0GW23 586 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 SRRM3A6NNA2 597 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 PLK4O00444 970 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 PEX11AO75192 247 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 NRG3P56975 720 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 MED22Q15528 200 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 XKR6Q5GH73 641 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 RAET1GQ6H3X3 334 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 DEF8Q6ZN54 512 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 SAPCD2Q86UD0 394 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 RGL4Q8IZJ4 473 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 UROC1Q96N76 676 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 FAM210AQ96ND0 272 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 SLC4A5Q9BY07 1137 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 PRRG4Q9BZD6 226 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 RAP2CQ9Y3L5 183 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 BBIP1A8MTZ0 92 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 SLC28A2O43868 658 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 SEMA3DO95025 777 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 CTDNEP1O95476 244 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 IDO1P14902 403 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 ANPEPP15144 967 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 ACAT1P24752 427 aaKnown RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 RBL1P28749 1068 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 MIPP30301 263 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 NOS2P35228 1153 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 BUD31P41223 144 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 CDH4P55283 916 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 PPP2R2BQ00005 443 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 DPYSQ14117 519 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 FSCN1Q16658 493 aaKnown RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 SLC39A12Q504Y0 691 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 RFTN2Q52LD8 501 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 CDKAL1Q5VV42 579 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 OR4A15Q8NGL6 344 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 FAR1Q8WVX9 515 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 CLIP3Q96DZ5 547 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 GPER1Q99527 375 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 TRIM2Q9C040 744 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 CST11Q9H112 138 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 MFSD1Q9H3U5 465 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 SEMA3GQ9NS98 782 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 OR14I1A6ND48 311 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 H3BRB1 525 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 KCNK1O00180 336 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 RSL1D1O76021 490 aaKnown RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 PTPN5P54829 565 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 IFI35P80217 286 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 HSPA14Q0VDF9 509 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 PRKG2Q13237 762 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 RAPSNQ13702 412 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 FNBP1LQ5T0N5 605 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 CRELD2Q6UXH1 353 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 PIWIL4Q7Z3Z4 852 aaKnown RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 DEFB128Q7Z7B8 93 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 GPALPP1Q8IXQ4 340 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 SLC2A14Q8TDB8 520 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 AENQ8WTP8 325 aaKnown RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 RAD51AP1Q96B01 352 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 C18orf25Q96B23 403 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 TUT1Q9H6E5 874 aaKnown RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 SLC27A6Q9Y2P4 619 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 GPSM3Q9Y4H4 160 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 TIMM13Q9Y5L4 95 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 TRAV19A0A0A6YYK7 116 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 DHRS12A0PJE2 317 aa9.04□□□□□ -0.96
BRCA1-205ENST00000461221 TRIM3O75382 744 aaPredicted RBP9.04□□□□□ -0.96
BRCA1-205ENST00000461221 UGT2B17O75795 530 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms