RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 OR2T34Q8NGX1 318 aa22.68■■□□□ 1.22
C9orf3-209ENST00000460573 OR14C36Q8NHC7 312 aa22.68■■□□□ 1.22
C9orf3-209ENST00000460573 ARRDC2Q8TBH0 407 aa22.68■■□□□ 1.22
C9orf3-209ENST00000460573 SPOCK2Q92563 424 aa22.68■■□□□ 1.22
C9orf3-209ENST00000460573 FOXJ1Q92949 421 aa22.68■■□□□ 1.22
C9orf3-209ENST00000460573 AGAP3Q96P47 875 aa22.68■■□□□ 1.22
C9orf3-209ENST00000460573 R3HDM2Q9Y2K5 976 aaKnown RBP22.68■■□□□ 1.22
C9orf3-209ENST00000460573 DMXL1Q9Y485 3027 aa22.67■■□□□ 1.22
C9orf3-209ENST00000460573 RNF103O00237 685 aa22.67■■□□□ 1.22
C9orf3-209ENST00000460573 TRAFD1O14545 582 aaPredicted RBP22.67■■□□□ 1.22
C9orf3-209ENST00000460573 HTRA2O43464 458 aaPredicted RBP22.67■■□□□ 1.22
C9orf3-209ENST00000460573 PLRG1O43660 514 aaKnown RBP22.67■■□□□ 1.22
C9orf3-209ENST00000460573 GDF9O60383 454 aa22.67■■□□□ 1.22
C9orf3-209ENST00000460573 PIGNO95427 931 aa22.67■■□□□ 1.22
C9orf3-209ENST00000460573 ADRB3P13945 408 aa22.67■■□□□ 1.22
C9orf3-209ENST00000460573 STIP1P31948 543 aaKnown RBP22.67■■□□□ 1.22
C9orf3-209ENST00000460573 ADPRHP54922 357 aa22.67■■□□□ 1.22
C9orf3-209ENST00000460573 SLC14A2Q15849 920 aa22.67■■□□□ 1.22
C9orf3-209ENST00000460573 CCNG2Q16589 344 aa22.67■■□□□ 1.22
C9orf3-209ENST00000460573 PARS2Q7L3T8 475 aaKnown RBP22.67■■□□□ 1.22
C9orf3-209ENST00000460573 CYP2U1Q7Z449 544 aa22.67■■□□□ 1.22
C9orf3-209ENST00000460573 ADAT2Q7Z6V5 191 aaKnown RBP22.67■■□□□ 1.22
C9orf3-209ENST00000460573 C17orf53Q8N3J3 647 aaPredicted RBP22.67■■□□□ 1.22
C9orf3-209ENST00000460573 ACTRT1Q8TDG2 376 aa22.67■■□□□ 1.22
C9orf3-209ENST00000460573 ECHDC3Q96DC8 303 aa22.67■■□□□ 1.22
C9orf3-209ENST00000460573 FAM118BQ9BPY3 351 aa22.67■■□□□ 1.22
C9orf3-209ENST00000460573 GPR174Q9BXC1 333 aa22.67■■□□□ 1.22
C9orf3-209ENST00000460573 SLC25A51Q9H1U9 297 aa22.67■■□□□ 1.22
C9orf3-209ENST00000460573 GLOD4Q9HC38 313 aa22.67■■□□□ 1.22
C9orf3-209ENST00000460573 KLHL8Q9P2G9 620 aaPredicted RBP22.67■■□□□ 1.22
C9orf3-209ENST00000460573 KCNN4O15554 427 aa22.66■■□□□ 1.22
C9orf3-209ENST00000460573 AP1G1O43747 822 aa22.66■■□□□ 1.22
C9orf3-209ENST00000460573 LIASO43766 372 aa22.66■■□□□ 1.22
C9orf3-209ENST00000460573 ETF1P62495 437 aaKnown RBP22.66■■□□□ 1.22
C9orf3-209ENST00000460573 DSC2Q02487 901 aa22.66■■□□□ 1.22
C9orf3-209ENST00000460573 NEK5Q6P3R8 708 aa22.66■■□□□ 1.22
C9orf3-209ENST00000460573 DRICH1Q6PGQ1 229 aaPredicted RBP22.66■■□□□ 1.22
C9orf3-209ENST00000460573 PID1Q7Z2X4 250 aa22.66■■□□□ 1.22
C9orf3-209ENST00000460573 TTC7BQ86TV6 843 aa22.66■■□□□ 1.22
C9orf3-209ENST00000460573 ZNF567Q8N184 647 aa22.66■■□□□ 1.22
C9orf3-209ENST00000460573 IMP4Q96G21 291 aaKnown RBP22.66■■□□□ 1.22
C9orf3-209ENST00000460573 CEP41Q9BYV8 373 aa22.66■■□□□ 1.22
C9orf3-209ENST00000460573 SMOC1Q9H4F8 434 aa22.66■■□□□ 1.22
C9orf3-209ENST00000460573 USP29Q9HBJ7 922 aa22.66■■□□□ 1.22
C9orf3-209ENST00000460573 PREBQ9HCU5 417 aa22.66■■□□□ 1.22
C9orf3-209ENST00000460573 DNPEPQ9ULA0 475 aa22.66■■□□□ 1.22
C9orf3-209ENST00000460573 TTC24A2A3L6 582 aaPredicted RBP22.65■■□□□ 1.22
C9orf3-209ENST00000460573 PGRMC1O00264 195 aaKnown RBP22.65■■□□□ 1.22
C9orf3-209ENST00000460573 PLK4O00444 970 aa22.65■■□□□ 1.22
C9orf3-209ENST00000460573 GJB3O75712 270 aa22.65■■□□□ 1.22
C9orf3-209ENST00000460573 XPAP23025 273 aaPredicted RBP22.65■■□□□ 1.22
C9orf3-209ENST00000460573 NFKBIAP25963 317 aa22.65■■□□□ 1.22
C9orf3-209ENST00000460573 NIPAL4Q0D2K0 466 aa22.65■■□□□ 1.22
C9orf3-209ENST00000460573 SIX1Q15475 284 aaPredicted RBP22.65■■□□□ 1.22
C9orf3-209ENST00000460573 UGP2Q16851 508 aa22.65■■□□□ 1.22
C9orf3-209ENST00000460573 ITPRIPL1Q6GPH6 555 aa22.65■■□□□ 1.22
C9orf3-209ENST00000460573 ZSCAN30Q86W11 494 aa22.65■■□□□ 1.22
C9orf3-209ENST00000460573 PAF1Q8N7H5 531 aa22.65■■□□□ 1.22
C9orf3-209ENST00000460573 NSMCE3Q96MG7 304 aa22.65■■□□□ 1.22
C9orf3-209ENST00000460573 PCDHGC4Q9Y5F7 938 aa22.65■■□□□ 1.22
C9orf3-209ENST00000460573 SAR1BQ9Y6B6 198 aa22.65■■□□□ 1.22
C9orf3-209ENST00000460573 ABCA7Q8IZY2 2146 aa22.64■■□□□ 1.22
C9orf3-209ENST00000460573 TBC1D3DA0A087WVF3 549 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 TBC1D3IA0A087WXS9 549 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 TBC1D3EA0A087X179 549 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 TBC1D3KA0A087X1G2 549 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 TBC1D3FA6NER0 549 aaPredicted RBP22.64■■□□□ 1.21
C9orf3-209ENST00000460573 C5orf60A6NFR6 353 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 METTL12A8MUP2 240 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 TBC1D3LB9A6J9 549 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 TBC1D3HP0C7X1 549 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 TIMP2P16035 220 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 DPP6P42658 865 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 ELP6Q0PNE2 266 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 OASLQ15646 514 aaKnown RBP22.64■■□□□ 1.21
C9orf3-209ENST00000460573 PPM1JQ5JR12 505 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 ARMC12Q5T9G4 340 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 TBC1D3GQ6DHY5 549 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 TBC1D3CQ6IPX1 549 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 TMEFF1Q8IYR6 380 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 TBC1D3Q8IZP1 549 aaPredicted RBP22.64■■□□□ 1.21
C9orf3-209ENST00000460573 COG1Q8WTW3 980 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 C1orf54Q8WWF1 131 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 ATG4AQ8WYN0 398 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 FCRL5Q96RD9 977 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 C10orf88Q9H8K7 445 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.64■■□□□ 1.21
C9orf3-209ENST00000460573 DRG1Q9Y295 367 aaKnown RBP22.64■■□□□ 1.21
C9orf3-209ENST00000460573 RAI2Q9Y5P3 530 aa22.64■■□□□ 1.21
C9orf3-209ENST00000460573 UPK3BL1B0FP48 263 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 UPK3BL2E5RIL1 263 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 TSPAN6O43657 245 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 OPHN1O60890 802 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 TUBB4AP04350 444 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 ITGAVP06756 1048 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 CD68P34810 354 aaPredicted RBP22.63■■□□□ 1.21
C9orf3-209ENST00000460573 CD86P42081 329 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 CCR5P51681 352 aa22.63■■□□□ 1.21
C9orf3-209ENST00000460573 TAS2R38P59533 333 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms