RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 CXorf21Q9HAI6 301 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ING3Q9NXR8 418 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 DDX43Q9NXZ2 648 aaKnown RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ATP6V1HQ9UI12 483 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 SIX4Q9UIU6 781 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 PTBP2Q9UKA9 531 aaKnown RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ING4Q9UNL4 249 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 MTF2Q9Y483 593 aaPredicted RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 RAD54BQ9Y620 910 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 LOC285556D6RIA3 1793 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 PRR5-ARHGAP8B1AHC4 643 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 E5RJQ4 531 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 F8VP50 259 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 GPR32O75388 356 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ASGR1P07306 291 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 GNAZP19086 355 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 PEX2P28328 305 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 PTGS2P35354 604 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 MARCKSL1P49006 195 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ARHGAP8P85298 464 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 UBAP2LQ14157 1087 aaKnown RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 NCF4Q15080 339 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 RFWD3Q6PCD5 774 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 MFSD7Q6UXD7 560 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 SLCO6A1Q86UG4 719 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 XYLT1Q86Y38 959 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 PDSS2Q86YH6 399 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 LINC01465Q8N7H1 131 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 TFAP2BQ92481 460 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 OTULINQ96BN8 352 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 SENP8Q96LD8 212 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 TAS2R1Q9NYW7 299 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 CDH9Q9ULB4 789 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ACOT9Q9Y305 439 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 RPS6KL1Q9Y6S9 549 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 WASF2Q9Y6W5 498 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 SBF1O95248 1867 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 H0YGN5 161 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 INPP4BO15327 924 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 COQ9O75208 318 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 GRAP2O75791 330 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 FKBP9O95302 570 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 PTPN1P18031 435 aaKnown RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 MSH3P20585 1137 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 GRK3P35626 688 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 NNMTP40261 264 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 PTGIRP43119 386 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ZNF135P52742 658 aaPredicted RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 PKNOX1P55347 436 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 RPL7AP62424 266 aaKnown RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 MYBPC3Q14896 1274 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 TAF5Q15542 800 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 KCNA10Q16322 511 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 SMTNL2Q2TAL5 461 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 VSTM1Q6UX27 236 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 CCDC149Q6ZUS6 474 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 FKBP9P1Q75LS8 142 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 TMC7Q7Z402 723 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ALDH16A1Q8IZ83 802 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 PGAM4Q8N0Y7 254 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 EMC1Q8N766 993 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 EFHD2Q96C19 240 aaPredicted RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ZHX1-C8orf76Q96EF9 292 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 IFT43Q96FT9 208 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 OTUB1Q96FW1 271 aaPredicted RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 GAD1Q99259 594 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 NUAK2Q9H093 628 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 RMND5AQ9H871 391 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ENTPD7Q9NQZ7 604 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 FAIMQ9NVQ4 179 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 IGSF9Q9P2J2 1179 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 C3orf18Q9UK00 162 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 DOLKQ9UPQ8 538 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 NFS1Q9Y697 457 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 PTCH2Q9Y6C5 1203 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 MYH10P35580 1976 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 BBIP1A8MTZ0 92 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 PSMD12O00232 456 aaPredicted RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 VAPBO95292 243 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 NADKO95544 446 aaPredicted RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 BPGMP07738 259 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 WARSP23381 471 aaKnown RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 KDELR1P24390 212 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 MIPP30301 263 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 SCNN1AP37088 669 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 TALDO1P37837 337 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 BCAP31P51572 246 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 IST1P53990 364 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 PRKCZQ05513 592 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 PPIGQ13427 754 aaKnown RBP eCLIP6.24□□□□□ -1.412e-6■■□□□ 14.2
VPS13D-202ENST00000460333 BTG3Q14201 252 aaPredicted RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 TRIP4Q15650 581 aaPredicted RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 RUNDC3AQ59EK9 446 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 RNF219Q5W0B1 726 aaPredicted RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 KLHL17Q6TDP4 642 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ADHFE1Q8IWW8 467 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 PACRGLQ8N7B6 248 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 B3GALNT2Q8NCR0 500 aa6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ZNF420Q8TAQ5 688 aaPredicted RBP6.24□□□□□ -1.41
VPS13D-202ENST00000460333 ZSCAN18Q8TBC5 510 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 257.2 ms