RNA–Protein interactions for RNA: ENST00000460227.4

MECP2-206, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-206ENST00000460227 RBM15Q96T37 977 aaKnown RBP eCLIP12.95□□□□□ -0.34
MECP2-206ENST00000460227 GPR174Q9BXC1 333 aa12.95□□□□□ -0.34
MECP2-206ENST00000460227 AP1M1Q9BXS5 423 aa12.95□□□□□ -0.34
MECP2-206ENST00000460227 SEMA4AQ9H3S1 761 aa12.95□□□□□ -0.34
MECP2-206ENST00000460227 KLHL8Q9P2G9 620 aaPredicted RBP12.95□□□□□ -0.34
MECP2-206ENST00000460227 HCN4Q9Y3Q4 1203 aa12.95□□□□□ -0.34
MECP2-206ENST00000460227 TTLL3Q9Y4R7 772 aa12.95□□□□□ -0.34
MECP2-206ENST00000460227 FADS3Q9Y5Q0 445 aa12.95□□□□□ -0.34
MECP2-206ENST00000460227 CACNA1HO95180 2353 aa12.95□□□□□ -0.34
MECP2-206ENST00000460227 DMDP11532 3685 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 KMT2EQ8IZD2 1858 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 METTL12A8MUP2 240 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 OPHN1O60890 802 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 NDUFS2O75306 463 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 STK10O94804 968 aaKnown RBP12.94□□□□□ -0.34
MECP2-206ENST00000460227 PGLSO95336 258 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 SEMA4FO95754 770 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 PDHA1P08559 390 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 ITIH2P19823 946 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 NFKB1P19838 968 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 ABL2P42684 1182 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 ADPRHP54922 357 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 SIM2Q14190 667 aaPredicted RBP12.94□□□□□ -0.34
MECP2-206ENST00000460227 PARP6Q2NL67 630 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 ARMC12Q5T9G4 340 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 NEK5Q6P3R8 708 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 KLHDC8BQ8IXV7 354 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 C12orf50Q8NA57 414 aaPredicted RBP12.94□□□□□ -0.34
MECP2-206ENST00000460227 OR2T34Q8NGX1 318 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 MAGOHBQ96A72 148 aaKnown RBP12.94□□□□□ -0.34
MECP2-206ENST00000460227 C16orf45Q96MC5 204 aaPredicted RBP12.94□□□□□ -0.34
MECP2-206ENST00000460227 PCED1AQ9H1Q7 454 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 EPC1Q9H2F5 836 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 FAM153AQ9UHL3 310 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 PHTF1Q9UMS5 762 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 CHKBQ9Y259 395 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 PCDHB9Q9Y5E1 797 aa12.94□□□□□ -0.34
MECP2-206ENST00000460227 NYNRINQ9P2P1 1898 aaKnown RBP12.93□□□□□ -0.34
MECP2-206ENST00000460227 CKAP5Q14008 2032 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 FRYLO94915 3013 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 TBC1D3DA0A087WVF3 549 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 TBC1D3IA0A087WXS9 549 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 TBC1D3EA0A087X179 549 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 TBC1D3KA0A087X1G2 549 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 LOC285095A0A1B0GVY8 99 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 TBC1D3FA6NER0 549 aaPredicted RBP12.93□□□□□ -0.34
MECP2-206ENST00000460227 LRRC72A6NJI9 287 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 TBC1D3LB9A6J9 549 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 PDE2AO00408 941 aaPredicted RBP12.93□□□□□ -0.34
MECP2-206ENST00000460227 RIOK3O14730 519 aaKnown RBP12.93□□□□□ -0.34
MECP2-206ENST00000460227 SPINT1O43278 529 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 RHOBTB1O94844 696 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 METTL18O95568 372 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 MT-CYBP00156 380 aaPredicted RBP12.93□□□□□ -0.34
MECP2-206ENST00000460227 EPOP01588 193 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 TBC1D3HP0C7X1 549 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 ETS1P14921 441 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 COILP38432 576 aaPredicted RBP12.93□□□□□ -0.34
MECP2-206ENST00000460227 PAFAH1B1P43034 410 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 RPL26P61254 145 aaKnown RBP12.93□□□□□ -0.34
MECP2-206ENST00000460227 RPL6Q02878 288 aaKnown RBP12.93□□□□□ -0.34
MECP2-206ENST00000460227 P3H1Q32P28 736 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 TMEM52BQ4KMG9 183 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 PMS2CLQ68D20 193 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 TBC1D3GQ6DHY5 549 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 ITPRIPL1Q6GPH6 555 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 TBC1D3CQ6IPX1 549 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 TTC27Q6P3X3 843 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 KDELC1Q6UW63 502 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 CEP68Q76N32 757 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 LPCAT2Q7L5N7 544 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 ZSCAN30Q86W11 494 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 SLC41A1Q8IVJ1 513 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 TMEFF1Q8IYR6 380 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 TBC1D3Q8IZP1 549 aaPredicted RBP12.93□□□□□ -0.34
MECP2-206ENST00000460227 CBARPQ8N350 705 aaPredicted RBP12.93□□□□□ -0.34
MECP2-206ENST00000460227 DEFB119Q8N690 84 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 SUMF1Q8NBK3 374 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 FOXJ1Q92949 421 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 SCRN2Q96FV2 425 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 OXNAD1Q96HP4 312 aaPredicted RBP12.93□□□□□ -0.34
MECP2-206ENST00000460227 FEM1CQ96JP0 617 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 CAPZA3Q96KX2 299 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 TRIB3Q96RU7 358 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 GORASP1Q9BQQ3 440 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 TDRD1Q9BXT4 1180 aaKnown RBP12.93□□□□□ -0.34
MECP2-206ENST00000460227 GBA3Q9H227 469 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 C6orf106Q9H6K1 298 aaPredicted RBP12.93□□□□□ -0.34
MECP2-206ENST00000460227 PCDH9Q9HC56 1237 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 PREBQ9HCU5 417 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 PCDH12Q9NPG4 1184 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 VPS45Q9NRW7 570 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 UBP1Q9NZI7 540 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 RSPH14Q9UHP6 348 aa12.93□□□□□ -0.34
MECP2-206ENST00000460227 RPL26L1Q9UNX3 145 aaKnown RBP12.93□□□□□ -0.34
MECP2-206ENST00000460227 UPK3BL1B0FP48 263 aa12.92□□□□□ -0.34
MECP2-206ENST00000460227 UPK3BL2E5RIL1 263 aa12.92□□□□□ -0.34
MECP2-206ENST00000460227 PROB1E7EW31 1015 aa12.92□□□□□ -0.34
MECP2-206ENST00000460227 KIF2AO00139 706 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms