RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 ARHGEF2Q92974 986 aaKnown RBP10.5□□□□□ -0.73
HERC4-207ENST00000460168 HIC2Q96JB3 615 aa10.5□□□□□ -0.73
HERC4-207ENST00000460168 ATP6V1G3Q96LB4 118 aa10.5□□□□□ -0.73
HERC4-207ENST00000460168 TSGA13Q96PP4 275 aa10.5□□□□□ -0.73
HERC4-207ENST00000460168 SLC22A12Q96S37 553 aa10.5□□□□□ -0.73
HERC4-207ENST00000460168 CCDC77Q9BR77 488 aa10.5□□□□□ -0.73
HERC4-207ENST00000460168 ATXN3LQ9H3M9 355 aa10.5□□□□□ -0.73
HERC4-207ENST00000460168 LRRC4CQ9HCJ2 640 aa10.5□□□□□ -0.73
HERC4-207ENST00000460168 ASAH2Q9NR71 780 aa10.5□□□□□ -0.73
HERC4-207ENST00000460168 IGSF9Q9P2J2 1179 aa10.5□□□□□ -0.73
HERC4-207ENST00000460168 PDP2Q9P2J9 529 aa10.5□□□□□ -0.73
HERC4-207ENST00000460168 BAIAP2L1Q9UHR4 511 aa10.5□□□□□ -0.73
HERC4-207ENST00000460168 COMMD3-BMI1R4GMX3 469 aa10.5□□□□□ -0.73
HERC4-207ENST00000460168 CEP290O15078 2479 aa10.5□□□□□ -0.73
HERC4-207ENST00000460168 A0A1W2PRU2 124 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 ARHGAP42A6NI28 874 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 DRGXA6NNA5 263 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 ZBTB24O43167 697 aaPredicted RBP10.49□□□□□ -0.73
HERC4-207ENST00000460168 RAMP2O60895 175 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 KLKB1P03952 638 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 CCND1P24385 295 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 SLC6A4P31645 630 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 PHBP35232 272 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 IRS1P35568 1242 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 HAAOP46952 286 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 SMAD3P84022 425 aaKnown RBP10.49□□□□□ -0.73
HERC4-207ENST00000460168 CDK16Q00536 496 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 TBL3Q12788 808 aaKnown RBP10.49□□□□□ -0.73
HERC4-207ENST00000460168 SHHQ15465 462 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 RABGAP1LQ5R372 815 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 ZNF600Q6ZNG1 722 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 SH2D3CQ8N5H7 860 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 MCUQ8NE86 351 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 KLF16Q9BXK1 252 aaPredicted RBP10.49□□□□□ -0.73
HERC4-207ENST00000460168 CEP44Q9C0F1 390 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 MAN1C1Q9NR34 630 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 IPO11Q9UI26 975 aaKnown RBP10.49□□□□□ -0.73
HERC4-207ENST00000460168 MYO7AQ13402 2215 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 OBSL1O75147 1896 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 PRSS47A8MTI9 375 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 TRDMT1O14717 391 aaKnown RBP10.49□□□□□ -0.73
HERC4-207ENST00000460168 MATN3O15232 486 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 NVLO15381 856 aaKnown RBP10.49□□□□□ -0.73
HERC4-207ENST00000460168 RFPL2O75678 378 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 ABHD2P08910 425 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 MYL4P12829 197 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 NFKB1P19838 968 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 ELK3P41970 407 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 CAMK1Q14012 370 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 POLD3Q15054 466 aaPredicted RBP10.49□□□□□ -0.73
HERC4-207ENST00000460168 ANO4Q32M45 955 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 C6orf118Q5T5N4 469 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 ADGRF1Q5T601 910 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 KIAA1614Q5VZ46 1190 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 AFMIDQ63HM1 303 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 CCDC81Q6ZN84 652 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 CAND1Q86VP6 1230 aaKnown RBP10.49□□□□□ -0.73
HERC4-207ENST00000460168 TMC8Q8IU68 726 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 MYEOVQ96EZ4 313 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 HMCESQ96FZ2 354 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 TEKT5Q96M29 485 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 NSMCE3Q96MG7 304 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 ALPK1Q96QP1 1244 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 TGS1Q96RS0 853 aaKnown RBP10.49□□□□□ -0.73
HERC4-207ENST00000460168 ROPN1BQ9BZX4 212 aaPredicted RBP10.49□□□□□ -0.73
HERC4-207ENST00000460168 KLHL4Q9C0H6 718 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 NOL6Q9H6R4 1146 aaKnown RBP10.49□□□□□ -0.73
HERC4-207ENST00000460168 ROPN1Q9HAT0 212 aaPredicted RBP10.49□□□□□ -0.73
HERC4-207ENST00000460168 SP110Q9HB58 689 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 CTNNAL1Q9UBT7 734 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 AGO1Q9UL18 857 aaKnown RBP10.49□□□□□ -0.73
HERC4-207ENST00000460168 CPQQ9Y646 472 aa10.49□□□□□ -0.73
HERC4-207ENST00000460168 ZFP37Q9Y6Q3 630 aaPredicted RBP10.49□□□□□ -0.73
HERC4-207ENST00000460168 NYNRINQ9P2P1 1898 aaKnown RBP10.49□□□□□ -0.73
HERC4-207ENST00000460168 GBF1Q92538 1859 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 EXOC1LA0A1B0GW35 172 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 GOLGA8CPA6NN73 597 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 SCAMP3O14828 347 aaKnown RBP10.48□□□□□ -0.73
HERC4-207ENST00000460168 RGS16O15492 202 aaPredicted RBP10.48□□□□□ -0.73
HERC4-207ENST00000460168 IDH3BO43837 385 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 ASLP04424 464 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 ITGA2BP08514 1039 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 CDK4P11802 303 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 KRT4P19013 534 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 SSTR1P30872 391 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 GRIA1P42261 906 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 MAPKAPK2P49137 400 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 HPCAP84074 193 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 STAT4Q14765 748 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 ANKRD39Q53RE8 183 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 CORO6Q6QEF8 472 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 CHPFQ8IZ52 775 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 CADM3Q8N126 398 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 ZFRQ96KR1 1074 aaKnown RBP10.48□□□□□ -0.73
HERC4-207ENST00000460168 MOGAT1Q96PD6 335 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 DDX50Q9BQ39 737 aaKnown RBP10.48□□□□□ -0.73
HERC4-207ENST00000460168 TMEM109Q9BVC6 243 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 CD93Q9NPY3 652 aa10.48□□□□□ -0.73
HERC4-207ENST00000460168 EIF2B3Q9NR50 452 aaKnown RBP10.48□□□□□ -0.73
HERC4-207ENST00000460168 TEX264Q9Y6I9 313 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms