RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 MARK2Q7KZI7 788 aaKnown RBP9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 TMEM135Q86UB9 458 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 MYLK4Q86YV6 388 aaPredicted RBP9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 GRIN3AQ8TCU5 1115 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 TCEAL4Q96EI5 215 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 BACE2Q9Y5Z0 518 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 SCN5AQ14524 2016 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 GPR39O43194 453 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 DCTN3O75935 186 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 BPGMP07738 259 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 CHRM3P20309 590 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 MAGEA3P43357 314 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 LIMK2P53671 638 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 CDH4P55283 916 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 YBEYP58557 167 aaPredicted RBP9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 FPGSQ05932 587 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 SMYD5Q6GMV2 418 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 CGB2Q6NT52 195 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 SDCCAG8Q86SQ7 713 aaPredicted RBP9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 PGBD5Q8N414 524 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 POU5F2Q8N7G0 328 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 C2orf15Q8WU43 125 aaKnown RBP9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 CCT6BQ92526 530 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 XPR1Q9UBH6 696 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 ZNF180Q9UJW8 692 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 RAI2Q9Y5P3 530 aa9.43□□□□□ -0.9
NUDCD3-203ENST00000460110 ANKRD12Q6UB98 2062 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 E9PBE3 544 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 KLHL41O60662 606 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 ALPIP09923 528 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 ALADP13716 330 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 SESN3P58005 492 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 PDAP1Q13442 181 aaKnown RBP9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 CCDC6Q16204 474 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 PIM3Q86V86 326 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 PLCD4Q9BRC7 762 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 DHRS4Q9BTZ2 278 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 SEZ6LQ9BYH1 1024 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 INSL6Q9Y581 213 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 TRAV19A0A0A6YYK7 116 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 AP3B1O00203 1094 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 PLIN3O60664 434 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 RHOBTB1O94844 696 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 TMCC1O94876 653 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 HNRNPLP14866 589 aaKnown RBP eCLIP9.42□□□□□ -0.97e-11■■■■□ 23.9
NUDCD3-203ENST00000460110 CNTFP26441 200 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 CRHR1P34998 444 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 STK19P49842 368 aaPredicted RBP9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 MNX1P50219 401 aaPredicted RBP9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 SLC18A2Q05940 514 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 RAB33AQ14088 237 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 MANEALQ5VSG8 457 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 NAPRTQ6XQN6 538 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 GAREM2Q75VX8 874 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 BEND5Q7L4P6 421 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 HIPK4Q8NE63 616 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 SH3RF2Q8TEC5 729 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 MZB1Q8WU39 189 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 PRICKLE1Q96MT3 831 aaPredicted RBP9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 EBF4Q9BQW3 602 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 BBS2Q9BXC9 721 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 EMILIN2Q9BXX0 1053 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 ACE2Q9BYF1 805 aaPredicted RBP9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 PHACTR1Q9C0D0 580 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 ALG9Q9H6U8 611 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 SLC40A1Q9NP59 571 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 ZDHHC4Q9NPG8 344 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 MARCH4Q9P2E8 410 aaPredicted RBP9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 APOBEC2Q9Y235 224 aaKnown RBP9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 TRIOBPQ9H2D6 2365 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 E5RI56 91 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 NEK3P51956 506 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 TSTD2Q5T7W7 516 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 KCTD11Q693B1 232 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 RANBP10Q6VN20 620 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 GRASPQ7Z6J2 395 aaPredicted RBP9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 LRRC49Q8IUZ0 686 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 APCDD1Q8J025 514 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 WFDC5Q8TCV5 224 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 IMP4Q96G21 291 aaKnown RBP9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 PRR11Q96HE9 360 aaPredicted RBP9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 OXCT2Q9BYC2 517 aaPredicted RBP9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 MAGEH1Q9H213 219 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 RHOJQ9H4E5 214 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 ACTR5Q9H9F9 607 aaPredicted RBP9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 ABCB8Q9NUT2 735 aa9.42□□□□□ -0.9
NUDCD3-203ENST00000460110 CCDC162PA2VCL2 907 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 C2orf81A6NN90 581 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 TRIM24O15164 1050 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 PRAMEF11O60813 436 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 CRCPO75575 148 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 SRP72O76094 671 aaKnown RBP9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 SUPT7LO94864 414 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 GFAPP14136 432 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 IRS1P35568 1242 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 TEAD2Q15562 447 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 KLC3Q6P597 504 aa9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 DDX53Q86TM3 631 aaKnown RBP9.41□□□□□ -0.9
NUDCD3-203ENST00000460110 ZC3HC1Q86WB0 502 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms