RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 RAI2Q9Y5P3 530 aa10.96□□□□□ -0.65
CCDC12-204ENST00000460035 ZFHX2Q9C0A1 2572 aaPredicted RBP10.96□□□□□ -0.66
CCDC12-204ENST00000460035 ZFC3H1O60293 1989 aaKnown RBP10.96□□□□□ -0.66
CCDC12-204ENST00000460035 ZNF106Q9H2Y7 1883 aaKnown RBP10.95□□□□□ -0.66
CCDC12-204ENST00000460035 ASCC3Q8N3C0 2202 aaKnown RBP10.95□□□□□ -0.66
CCDC12-204ENST00000460035 BCLAF3A2AJT9 711 aaKnown RBP10.95□□□□□ -0.66
CCDC12-204ENST00000460035 CTAGE9A4FU28 777 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 METTL12A8MUP2 240 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 F5H423 210 aaPredicted RBP10.95□□□□□ -0.66
CCDC12-204ENST00000460035 PLRG1O43660 514 aaKnown RBP10.95□□□□□ -0.66
CCDC12-204ENST00000460035 RNGTTO60942 597 aaKnown RBP10.95□□□□□ -0.66
CCDC12-204ENST00000460035 SOCS5O75159 536 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 ITIH2P19823 946 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 MAOBP27338 520 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 ABL2P42684 1182 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 FAM193AP78312 1265 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 TRAF2Q12933 501 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 WDR45BQ5MNZ6 344 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 ARMC12Q5T9G4 340 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 LYSMD4Q5XG99 296 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 LAIR1Q6GTX8 287 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 BRAT1Q6PJG6 821 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 CYP2U1Q7Z449 544 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 KDELC2Q7Z4H8 507 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 PRPF39Q86UA1 669 aaKnown RBP10.95□□□□□ -0.66
CCDC12-204ENST00000460035 SLC41A1Q8IVJ1 513 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 ZNF567Q8N184 647 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 FAM71DQ8N9W8 422 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 SLC35B2Q8TB61 432 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 ARRDC2Q8TBH0 407 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 RAB7BQ96AH8 199 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 ECHDC3Q96DC8 303 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 MS4A14Q96JA4 679 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 LOXL4Q96JB6 756 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 FEM1CQ96JP0 617 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 OSBPL9Q96SU4 736 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 RBM15Q96T37 977 aaKnown RBP eCLIP10.95□□□□□ -0.66
CCDC12-204ENST00000460035 NAPGQ99747 312 aaPredicted RBP10.95□□□□□ -0.66
CCDC12-204ENST00000460035 FRMD8P1Q9BZ68 369 aaPredicted RBP10.95□□□□□ -0.66
CCDC12-204ENST00000460035 MIR1-1HGQ9H1L0 117 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 SLC25A51Q9H1U9 297 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 ARRDC1-AS1Q9H2J1 176 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 KDM4CQ9H3R0 1056 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 NCDNQ9UBB6 729 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 TRHDEQ9UKU6 1024 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 DNPEPQ9ULA0 475 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 SNX12Q9UMY4 172 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 ZNF148Q9UQR1 794 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 PCDHB9Q9Y5E1 797 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 FADS3Q9Y5Q0 445 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 PCDH15Q96QU1 1955 aa10.95□□□□□ -0.66
CCDC12-204ENST00000460035 A0A1W2PQ67 120 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 A0A1W2PQU0 124 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 A8MX80 341 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 UPK3BL1B0FP48 263 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 UPK3BL2E5RIL1 263 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 CES2O00748 559 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 TRAFD1O14545 582 aaPredicted RBP10.94□□□□□ -0.66
CCDC12-204ENST00000460035 HTRA2O43464 458 aaPredicted RBP10.94□□□□□ -0.66
CCDC12-204ENST00000460035 TSPAN6O43657 245 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 AP1G1O43747 822 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 CPP00450 1065 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 PRKCGP05129 697 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 RETP07949 1114 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 NFKB1P19838 968 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 CA4P22748 312 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 ITPKAP23677 461 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 MAT2AP31153 395 aaKnown RBP10.94□□□□□ -0.66
CCDC12-204ENST00000460035 SUOXP51687 545 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 EPHB1P54762 984 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 TAS2R38P59533 333 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 SKOR1P84550 965 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 SEMG2Q02383 582 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 SIX1Q15475 284 aaPredicted RBP10.94□□□□□ -0.66
CCDC12-204ENST00000460035 SLC14A2Q15849 920 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 UGP2Q16851 508 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 ERAP2Q6P179 960 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 ZSWIM9Q86XI8 627 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 RASGEF1CQ8N431 466 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 COG1Q8WTW3 980 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 KLK6Q92876 244 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 BIRC7Q96CA5 298 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 IMP4Q96G21 291 aaKnown RBP10.94□□□□□ -0.66
CCDC12-204ENST00000460035 TMEM121Q9BTD3 319 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 USP29Q9HBJ7 922 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 PREBQ9HCU5 417 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 PCDH12Q9NPG4 1184 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 UBP1Q9NZI7 540 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 RSPH14Q9UHP6 348 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 EIF2B4Q9UI10 523 aaKnown RBP10.94□□□□□ -0.66
CCDC12-204ENST00000460035 TTC7AQ9ULT0 858 aaPredicted RBP10.94□□□□□ -0.66
CCDC12-204ENST00000460035 TPX2Q9ULW0 747 aaKnown RBP10.94□□□□□ -0.66
CCDC12-204ENST00000460035 PHTF1Q9UMS5 762 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 CHKBQ9Y259 395 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 ITM2BQ9Y287 266 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 ZKSCAN5Q9Y2L8 839 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 ZNF292O60281 2723 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 LRP4O75096 1905 aa10.94□□□□□ -0.66
CCDC12-204ENST00000460035 GOLGA4Q13439 2230 aaKnown RBP10.93□□□□□ -0.66
CCDC12-204ENST00000460035 ATXN2Q99700 1313 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms