RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 ABL2P42684 1182 aa18.34■□□□□ 0.53
TRIM13-206ENST00000457662 ELP6Q0PNE2 266 aa18.34■□□□□ 0.53
TRIM13-206ENST00000457662 ASCL5Q7RTU5 278 aa18.34■□□□□ 0.53
TRIM13-206ENST00000457662 ADAT2Q7Z6V5 191 aaKnown RBP18.34■□□□□ 0.53
TRIM13-206ENST00000457662 ZSCAN30Q86W11 494 aa18.34■□□□□ 0.53
TRIM13-206ENST00000457662 TRIM69Q86WT6 500 aa18.34■□□□□ 0.53
TRIM13-206ENST00000457662 SYT12Q8IV01 421 aa18.34■□□□□ 0.53
TRIM13-206ENST00000457662 SLC35B2Q8TB61 432 aa18.34■□□□□ 0.53
TRIM13-206ENST00000457662 PDCD6IPQ8WUM4 868 aaKnown RBP18.34■□□□□ 0.53
TRIM13-206ENST00000457662 PIGKQ92643 395 aa18.34■□□□□ 0.53
TRIM13-206ENST00000457662 ARRDC1-AS1Q9H2J1 176 aa18.34■□□□□ 0.53
TRIM13-206ENST00000457662 KLHL8Q9P2G9 620 aaPredicted RBP18.34■□□□□ 0.53
TRIM13-206ENST00000457662 RAI2Q9Y5P3 530 aa18.34■□□□□ 0.53
TRIM13-206ENST00000457662 KCNN4O15554 427 aa18.33■□□□□ 0.53
TRIM13-206ENST00000457662 RNGTTO60942 597 aaKnown RBP18.33■□□□□ 0.53
TRIM13-206ENST00000457662 FGGP02679 453 aa18.33■□□□□ 0.53
TRIM13-206ENST00000457662 IGHV4-34P06331 123 aa18.33■□□□□ 0.53
TRIM13-206ENST00000457662 NFKBIAP25963 317 aa18.33■□□□□ 0.53
TRIM13-206ENST00000457662 NUDT1P36639 197 aa18.33■□□□□ 0.53
TRIM13-206ENST00000457662 TRAF2Q12933 501 aa18.33■□□□□ 0.53
TRIM13-206ENST00000457662 HS1BP3Q53T59 392 aa18.33■□□□□ 0.53
TRIM13-206ENST00000457662 ARMC12Q5T9G4 340 aa18.33■□□□□ 0.53
TRIM13-206ENST00000457662 PRPF39Q86UA1 669 aaKnown RBP18.33■□□□□ 0.53
TRIM13-206ENST00000457662 ZNF567Q8N184 647 aa18.33■□□□□ 0.53
TRIM13-206ENST00000457662 IMP4Q96G21 291 aaKnown RBP18.33■□□□□ 0.53
TRIM13-206ENST00000457662 C10orf88Q9H8K7 445 aa18.33■□□□□ 0.53
TRIM13-206ENST00000457662 USP29Q9HBJ7 922 aa18.33■□□□□ 0.53
TRIM13-206ENST00000457662 PILRBQ9UKJ0 227 aa18.33■□□□□ 0.53
TRIM13-206ENST00000457662 PHTF1Q9UMS5 762 aa18.33■□□□□ 0.53
TRIM13-206ENST00000457662 ZKSCAN5Q9Y2L8 839 aa18.33■□□□□ 0.53
TRIM13-206ENST00000457662 PCDHB9Q9Y5E1 797 aa18.33■□□□□ 0.53
TRIM13-206ENST00000457662 ANKRD36A6QL64 1941 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 CFAP69A5D8W1 941 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 LATO43561 262 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 LRP3O75074 770 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 PGLSO95336 258 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 MMP2P08253 660 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 CD27P26842 260 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 MAOBP27338 520 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 CD86P42081 329 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 RPS21P63220 83 aaKnown RBP18.33■□□□□ 0.52
TRIM13-206ENST00000457662 SKOR1P84550 965 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 SLC14A2Q15849 920 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 CCNG2Q16589 344 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 LONRF2Q1L5Z9 754 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 KIAA1161Q6NSJ0 714 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 ERAP2Q6P179 960 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 HORMAD1Q86X24 394 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 ZSWIM9Q86XI8 627 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 NDUFAF2Q8N183 169 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 RASGEF1CQ8N431 466 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 SNX19Q92543 992 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 OSBPL9Q96SU4 736 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 PCDH12Q9NPG4 1184 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 HOMER3Q9NSC5 361 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 SUSD2Q9UGT4 822 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 EIF2B4Q9UI10 523 aaKnown RBP18.33■□□□□ 0.52
TRIM13-206ENST00000457662 DNPEPQ9ULA0 475 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 TTC7AQ9ULT0 858 aaPredicted RBP18.33■□□□□ 0.52
TRIM13-206ENST00000457662 SNX12Q9UMY4 172 aa18.33■□□□□ 0.52
TRIM13-206ENST00000457662 VPS13AQ96RL7 3174 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 A0A1W2PPC4 97 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 A0A1W2PQU0 124 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 CES2O00748 559 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 RIOK3O14730 519 aaKnown RBP18.32■□□□□ 0.52
TRIM13-206ENST00000457662 LIASO43766 372 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 FZD6O60353 706 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 CPP00450 1065 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 GNSP15586 552 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 STIP1P31948 543 aaKnown RBP18.32■□□□□ 0.52
TRIM13-206ENST00000457662 CD68P34810 354 aaPredicted RBP18.32■□□□□ 0.52
TRIM13-206ENST00000457662 PLA2G5P39877 138 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 MPLP40238 635 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 PPP2CBP62714 309 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 PPP2CAP67775 309 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 IHHQ14623 411 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 TMEM52BQ4KMG9 183 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 PEAR1Q5VY43 1037 aaPredicted RBP18.32■□□□□ 0.52
TRIM13-206ENST00000457662 ITPRIPL1Q6GPH6 555 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 RABEPKQ7Z6M1 372 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 CEP76Q8TAP6 659 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 C1orf54Q8WWF1 131 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 FCRL5Q96RD9 977 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 RBM15Q96T37 977 aaKnown RBP eCLIP18.32■□□□□ 0.523e-6■■■■□ 20.5
TRIM13-206ENST00000457662 NAP1L3Q99457 506 aaPredicted RBP18.32■□□□□ 0.52
TRIM13-206ENST00000457662 MIR1-1HGQ9H1L0 117 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 TMEM74BQ9NUR3 256 aa18.32■□□□□ 0.52
TRIM13-206ENST00000457662 ZFHX2Q9C0A1 2572 aaPredicted RBP18.31■□□□□ 0.52
TRIM13-206ENST00000457662 OTOGLQ3ZCN5 2332 aa18.31■□□□□ 0.52
TRIM13-206ENST00000457662 C5orf60A6NFR6 353 aa18.31■□□□□ 0.52
TRIM13-206ENST00000457662 GFRA3O60609 400 aa18.31■□□□□ 0.52
TRIM13-206ENST00000457662 PRLRP16471 622 aa18.31■□□□□ 0.52
TRIM13-206ENST00000457662 TCP1P17987 556 aaKnown RBP18.31■□□□□ 0.52
TRIM13-206ENST00000457662 ITIH2P19823 946 aa18.31■□□□□ 0.52
TRIM13-206ENST00000457662 MAT2AP31153 395 aaKnown RBP18.31■□□□□ 0.52
TRIM13-206ENST00000457662 RPL26P61254 145 aaKnown RBP18.31■□□□□ 0.52
TRIM13-206ENST00000457662 FAM193AP78312 1265 aa18.31■□□□□ 0.52
TRIM13-206ENST00000457662 SIX1Q15475 284 aaPredicted RBP18.31■□□□□ 0.52
TRIM13-206ENST00000457662 SETMARQ53H47 684 aaPredicted RBP18.31■□□□□ 0.52
TRIM13-206ENST00000457662 LRRC73Q5JTD7 316 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms