RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 TFR2Q9UP52 801 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 HEY1Q9Y5J3 304 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 HS3ST3A1Q9Y663 406 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 ALG6Q9Y672 507 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 LAMA1P25391 3075 aa18.25■□□□□ 0.51
PDLIM2-215ENST00000456545 A0A0A6YYK5 440 aaPredicted RBP18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 A0A1B0GTQ1 180 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 A6NNZ2 444 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 APOL1O14791 398 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 AREL1O15033 823 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 MUSKO15146 869 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 YKT6O15498 198 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 FLRT2O43155 660 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 ZFXP17010 805 aaPredicted RBP18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 ITIH2P19823 946 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 CCNCP24863 283 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 HADHBP55084 474 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 SIM1P81133 766 aaPredicted RBP18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 GALNT2Q10471 571 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 TRIP6Q15654 476 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 PTAR1Q7Z6K3 402 aaPredicted RBP18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 DAAM2Q86T65 1068 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 TXLNBQ8N3L3 684 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 FAF2Q96CS3 445 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 CALR3Q96L12 384 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 NUDCD1Q96RS6 583 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 C1QTNF2Q9BXJ5 285 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 ERVMER34-1Q9H9K5 563 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 TTLL3Q9Y4R7 772 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 TMEM131Q92545 1883 aa18.24■□□□□ 0.51
PDLIM2-215ENST00000456545 SPAARA0A1B0GVQ0 90 aa18.23■□□□□ 0.51
PDLIM2-215ENST00000456545 A0A1W2PQ67 120 aa18.23■□□□□ 0.51
PDLIM2-215ENST00000456545 TTC24A2A3L6 582 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-215ENST00000456545 MATN3O15232 486 aa18.23■□□□□ 0.51
PDLIM2-215ENST00000456545 LZTS3O60299 673 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-215ENST00000456545 ADRB1P08588 477 aa18.23■□□□□ 0.51
PDLIM2-215ENST00000456545 NFKBIAP25963 317 aa18.23■□□□□ 0.51
PDLIM2-215ENST00000456545 MAXP61244 160 aa18.23■□□□□ 0.51
PDLIM2-215ENST00000456545 GBE1Q04446 702 aa18.23■□□□□ 0.51
PDLIM2-215ENST00000456545 TMEM52BQ4KMG9 183 aa18.23■□□□□ 0.51
PDLIM2-215ENST00000456545 Q6ZSR6 202 aa18.23■□□□□ 0.51
PDLIM2-215ENST00000456545 DCP2Q8IU60 420 aaKnown RBP18.23■□□□□ 0.51
PDLIM2-215ENST00000456545 PQLC3Q8N755 202 aa18.23■□□□□ 0.51
PDLIM2-215ENST00000456545 TMEM145Q8NBT3 493 aa18.23■□□□□ 0.51
PDLIM2-215ENST00000456545 ASB12Q8WXK4 309 aa18.23■□□□□ 0.51
PDLIM2-215ENST00000456545 PCDH12Q9NPG4 1184 aa18.23■□□□□ 0.51
PDLIM2-215ENST00000456545 RBM22Q9NW64 420 aaKnown RBP eCLIP18.23■□□□□ 0.514e-6■■■■□ 24.3
PDLIM2-215ENST00000456545 PCDHGC4Q9Y5F7 938 aa18.23■□□□□ 0.51
PDLIM2-215ENST00000456545 TSPAN11A1L157 253 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 ZNF487B1APH4 448 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 RIOK3O14730 519 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 PSTPIP1O43586 416 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 PCDHGA12O60330 932 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 PEX11BO96011 259 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 FECHP22830 423 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 GRK6P43250 576 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 DYNLT1P63172 113 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 RALGPS1Q5JS13 557 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 RAD9BQ6WBX8 426 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 VSIG1Q86XK7 387 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 SPATS2Q86XZ4 545 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 GATAD2AQ86YP4 633 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 CCDC50Q8IVM0 306 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 CCDC13Q8IYE1 715 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 PGBD5Q8N414 524 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 OR13H1Q8NG92 308 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 VOPP1Q96AW1 172 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 TSGA13Q96PP4 275 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 LENG8Q96PV6 779 aaPredicted RBP18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 CDC6Q99741 560 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 MGME1Q9BQP7 344 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 POLR1EQ9GZS1 481 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 GOLPH3Q9H4A6 298 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 NOD2Q9HC29 1040 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 ATP8A1Q9Y2Q0 1164 aa18.22■□□□□ 0.51
PDLIM2-215ENST00000456545 ZRANB2O95218 330 aaKnown RBP eCLIP18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 PRKCGP05129 697 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 CCNB1P14635 433 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 CES1P23141 567 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 RABIFP47224 123 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 SEMG2Q02383 582 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 AP1B1Q10567 949 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 TFDP2Q14188 446 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 FGL2Q14314 439 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 PDK1Q15118 436 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 KAZNQ674X7 775 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 GCNT7Q6ZNI0 430 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 BZW1Q7L1Q6 419 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 ABI3BPQ7Z7G0 1075 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 RCOR2Q8IZ40 523 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 NDUFAF2Q8N183 169 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 ACRBPQ8NEB7 543 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 LRRN4Q8WUT4 740 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 BMFQ96LC9 184 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 SEMA3CQ99985 751 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 DTLQ9NZJ0 730 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 PCOLCE2Q9UKZ9 415 aa18.21■□□□□ 0.51
PDLIM2-215ENST00000456545 ANKRD36A6QL64 1941 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms