RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 CLPXO76031 633 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 UFL1O94874 794 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 ESRRBO95718 433 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 CPNE6O95741 557 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 NME5P56597 212 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 ADARB1P78563 741 aaKnown RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 DBPQ10586 325 aaPredicted RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 CLUL1Q15846 466 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 OTUD3Q5T2D3 398 aaPredicted RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 ATAD3BQ5T9A4 648 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 PXDC1Q5TGL8 231 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 CDC42EP5Q6NZY7 148 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 CCDC174Q6PII3 467 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 CCDC81Q6ZN84 652 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 SYDE1Q6ZW31 735 aaPredicted RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 STRADAQ7RTN6 431 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 GATAD2AQ86YP4 633 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 SPPL2CQ8IUH8 684 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 MFSD2AQ8NA29 543 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 TMEM174Q8WUU8 243 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 CASP10Q92851 521 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 ST6GAL2Q96JF0 529 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 PSD2Q9BQI7 771 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 PIF1Q9H611 641 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 SMURF2Q9HAU4 748 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 TMEM8AQ9HCN3 771 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 VPS45Q9NRW7 570 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 MUTYHQ9UIF7 546 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 SIX4Q9UIU6 781 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 ZNF225Q9UK10 706 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 USP21Q9UK80 565 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 TBX20Q9UMR3 447 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 MYRFQ9Y2G1 1151 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 SBF1O95248 1867 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 WDR27A2RRH5 827 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 SPAG6O75602 509 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 SCNN1GP51170 649 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 LIMK1P53667 647 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 CDH13P55290 713 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 XIAPP98170 497 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 FAM47CQ5HY64 1035 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 C4orf22Q6V702 233 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 R3HCC1LQ7Z5L2 792 aaKnown RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 DCBLD1Q8N8Z6 715 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 NDNFQ8TB73 568 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 CAPSLQ8WWF8 208 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 FIG4Q92562 907 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 HDAC11Q96DB2 347 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 DGCR6LQ9BY27 220 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 PNPLA8Q9NP80 782 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 MKS1Q9NXB0 559 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 PLK2Q9NYY3 685 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 PCDHB3Q9Y5E6 796 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 FER1L6Q2WGJ9 1857 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 SCN2AQ99250 2005 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 NAV1Q8NEY1 1877 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 NOTOA8MTQ0 251 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 I3L4J1 428 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 APOC4-APOC2K7ER74 178 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 RGS13O14921 159 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 DSCR3O14972 297 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 LRRTM2O43300 516 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 CNOT3O75175 753 aaKnown RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 APOC2P02655 101 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 CYBBP04839 570 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 ASNSP08243 561 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 ENO2P09104 434 aaPredicted RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 IQCF3P0C7M6 154 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 SLC35E2BP0CK96 405 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 CRHBPP24387 322 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 TGM4P49221 684 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 CCT8P50990 548 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 DIO3P55073 304 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 MADCAM1Q13477 382 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 GBX1Q14549 363 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 ZMAT1Q5H9K5 638 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 GLRA4Q5JXX5 417 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 SYPL2Q5VXT5 272 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 MAP1SQ66K74 1059 aaPredicted RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 RSBN1LQ6PCB5 846 aaPredicted RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 KIAA1324Q6UXG2 1013 aaKnown RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 SLC22A16Q86VW1 577 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 PELI3Q8N2H9 469 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 FSTL5Q8N475 847 aaPredicted RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 ESX1Q8N693 406 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 ANKRD49Q8WVL7 239 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 LZICQ8WZA0 190 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 PPP1R14BQ96C90 147 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 HBEGFQ99075 208 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 IMPG2Q9BZV3 1241 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 ZCCHC4Q9H5U6 513 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 LRRC40Q9H9A6 602 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 AGPAT4Q9NRZ5 378 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 TMEM30AQ9NV96 361 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 DTLQ9NZJ0 730 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 ENPP5Q9UJA9 477 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 APOBEC2Q9Y235 224 aaKnown RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 PABPN1LA6NDY0 278 aaKnown RBP4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 AP3B1O00203 1094 aa4.58□□□□□ -1.68
DEPDC1-202ENST00000456315 PSTPIP1O43586 416 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms