RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 PRR5-ARHGAP8B1AHC4 643 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 TRIM77I1YAP6 450 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 CLPXO76031 633 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 KRT3P12035 628 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 NCAM1P13591 858 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 ATF2P15336 505 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 PRKACAP17612 351 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 CD52P31358 61 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 RFC1P35251 1148 aaPredicted RBP7.71□□□□□ -1.18
HDAC9-218ENST00000456174 GJC1P36383 396 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 NR4A2P43354 598 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 MAGEA4P43358 317 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 VEGFBP49765 207 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 MLLT6P55198 1093 aaPredicted RBP7.71□□□□□ -1.18
HDAC9-218ENST00000456174 ARHGAP8P85298 464 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 SLC25A3Q00325 362 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 OGDHQ02218 1023 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 RALGDSQ12967 914 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 NFATC3Q12968 1075 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 PIGHQ14442 188 aaPredicted RBP7.71□□□□□ -1.18
HDAC9-218ENST00000456174 LLGL1Q15334 1064 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 GOLGA7BQ2TAP0 167 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 INAVAQ3KP66 663 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 BBS9Q3SYG4 887 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 SV2CQ496J9 727 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 PPP6R3Q5H9R7 873 aaPredicted RBP7.71□□□□□ -1.18
HDAC9-218ENST00000456174 PPP1R26Q5T8A7 1209 aaPredicted RBP7.71□□□□□ -1.18
HDAC9-218ENST00000456174 GALNT18Q6P9A2 607 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 CAND1Q86VP6 1230 aaKnown RBP7.71□□□□□ -1.18
HDAC9-218ENST00000456174 FBXW8Q8N3Y1 598 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 ASCC1Q8N9N2 400 aaKnown RBP7.71□□□□□ -1.18
HDAC9-218ENST00000456174 BANPQ8N9N5 519 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 APPL2Q8NEU8 664 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 LPPQ93052 612 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 VMP1Q96GC9 406 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 C9orf72Q96LT7 481 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 ZNF597Q96LX8 424 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 CDK5RAP1Q96SZ6 601 aaKnown RBP7.71□□□□□ -1.18
HDAC9-218ENST00000456174 OSBPL11Q9BXB4 747 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 CXorf21Q9HAI6 301 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 NEK6Q9HC98 313 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.71□□□□□ -1.18
HDAC9-218ENST00000456174 BCAP29Q9UHQ4 241 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 NME7Q9Y5B8 376 aa7.71□□□□□ -1.18
HDAC9-218ENST00000456174 EVPLLA8MZ36 301 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 F8VP50 259 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 FSCN2O14926 492 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 SHOXO15266 292 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 HUS1O60921 280 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 ZNF254O75437 659 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 SEC24DO94855 1032 aaPredicted RBP7.7□□□□□ -1.18
HDAC9-218ENST00000456174 INHAP05111 366 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 PFKMP08237 780 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 TCF4P15884 667 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 LRPAP1P30533 357 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 LILRA4P59901 499 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 GNA12Q03113 381 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 POU6F1Q14863 301 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 DUSP7Q16829 419 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 KATNAL2Q8IYT4 538 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 CLIP4Q8N3C7 705 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 NIPA2Q8N8Q9 360 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 SIMC1Q8NDZ2 872 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 JOSD2Q8TAC2 188 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 TCP10LQ8TDR4 215 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 TRIM63Q969Q1 353 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 METTL2AQ96IZ6 378 aaKnown RBP7.7□□□□□ -1.18
HDAC9-218ENST00000456174 SNX18Q96RF0 628 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 GAD1Q99259 594 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 DPEP3Q9H4B8 488 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 NANOGQ9H9S0 305 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 SYTL2Q9HCH5 934 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 FAM49BQ9NUQ9 324 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 EIF3LQ9Y262 564 aaKnown RBP7.7□□□□□ -1.18
HDAC9-218ENST00000456174 OR5K3A6NET4 321 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 MOXD2PA6NHM9 499 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 CLDN25C9JDP6 229 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 HCRTO43612 131 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 FKTNO75072 461 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 SPAG6O75602 509 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 MYCP01106 439 aaPredicted RBP7.7□□□□□ -1.18
HDAC9-218ENST00000456174 THP07101 528 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 PSMA2P25787 234 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 LMO2P25791 158 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 PTGS2P35354 604 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 IDUAP35475 653 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 ETV4P43268 484 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 EPHB1P54762 984 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 ECT2LQ008S8 904 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 GALK2Q01415 458 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 GBE1Q04446 702 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 SELPLGQ14242 412 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 MDH1BQ5I0G3 518 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 RALGPS1Q5JS13 557 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 EFHC2Q5JST6 749 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 PRR23CQ6ZRP0 262 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 LINC00299Q6ZSB3 139 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 KCTD20Q7Z5Y7 419 aa7.7□□□□□ -1.18
HDAC9-218ENST00000456174 ZCCHC9Q8N567 271 aaKnown RBP7.7□□□□□ -1.18
HDAC9-218ENST00000456174 GRIN3AQ8TCU5 1115 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms