RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 MT-CO3P00414 261 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 ERCC2P18074 760 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 PRKCIP41743 596 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 ELP6Q0PNE2 266 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 PTK2BQ14289 1009 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 GRM3Q14832 879 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 NR1I3Q14994 352 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 IQCB1Q15051 598 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 UGP2Q16851 508 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 DEFB133Q30KQ1 61 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 CFAP58Q5T655 872 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 ZCCHC8Q6NZY4 707 aaKnown RBP12.52□□□□□ -0.41
SMCR2-201ENST00000456090 CYP4V2Q6ZWL3 525 aaPredicted RBP12.52□□□□□ -0.41
SMCR2-201ENST00000456090 RBFAQ8N0V3 343 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 CACTIN-AS1Q8N1I8 211 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 NPWQ8N729 165 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 FAM181AQ8N9Y4 354 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 TP53I13Q8NBR0 393 aaPredicted RBP12.52□□□□□ -0.41
SMCR2-201ENST00000456090 LMX1AQ8TE12 382 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 TCEAL2Q9H3H9 227 aaPredicted RBP12.52□□□□□ -0.41
SMCR2-201ENST00000456090 SP110Q9HB58 689 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 PCDH12Q9NPG4 1184 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 MBNL1Q9NR56 388 aaKnown RBP12.52□□□□□ -0.41
SMCR2-201ENST00000456090 MYO1AQ9UBC5 1043 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 APOBEC3BQ9UH17 382 aaKnown RBP12.52□□□□□ -0.41
SMCR2-201ENST00000456090 COQ6Q9Y2Z9 468 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 CSNK1G3Q9Y6M4 447 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 SCINQ9Y6U3 715 aa12.52□□□□□ -0.41
SMCR2-201ENST00000456090 ZFC3H1O60293 1989 aaKnown RBP12.51□□□□□ -0.41
SMCR2-201ENST00000456090 A0A087WV48 116 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 TSPAN11A1L157 253 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 KALRNO60229 2985 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 OPA1O60313 960 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 BUB1BO60566 1050 aaPredicted RBP12.51□□□□□ -0.41
SMCR2-201ENST00000456090 GP1BAP07359 652 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 C6P13671 934 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 HOXB3P14651 431 aaPredicted RBP12.51□□□□□ -0.41
SMCR2-201ENST00000456090 RGRP47804 291 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 DUSP3P51452 185 aaPredicted RBP12.51□□□□□ -0.41
SMCR2-201ENST00000456090 SUOXP51687 545 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 YPEL5P62699 121 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 RTP5Q14D33 572 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 IRF4Q15306 451 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 CDKN3Q16667 212 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 TMEM52BQ4KMG9 183 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 PRRT3Q5FWE3 981 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 AFMIDQ63HM1 303 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 ERAP2Q6P179 960 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 BRAT1Q6PJG6 821 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 MACC1Q6ZN28 852 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 ARHGAP36Q6ZRI8 547 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 PDZD3Q86UT5 571 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 CAMK1DQ8IU85 385 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 PSTKQ8IV42 348 aaKnown RBP12.51□□□□□ -0.41
SMCR2-201ENST00000456090 ARHGAP12Q8IWW6 846 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 TSEN2Q8NCE0 465 aaKnown RBP12.51□□□□□ -0.41
SMCR2-201ENST00000456090 IFI44Q8TCB0 444 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 HCAR2Q8TDS4 363 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 BTN2A2Q8WVV5 523 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 TRIM11Q96F44 468 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 ZNF641Q96N77 438 aaPredicted RBP12.51□□□□□ -0.41
SMCR2-201ENST00000456090 TUBGCP5Q96RT8 1024 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 FUCA2Q9BTY2 467 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 CINPQ9BW66 212 aaPredicted RBP12.51□□□□□ -0.41
SMCR2-201ENST00000456090 EDEM3Q9BZQ6 932 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 SLC13A1Q9BZW2 595 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 ABCG4Q9H172 646 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 USP29Q9HBJ7 922 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 MRPL47Q9HD33 250 aaKnown RBP12.51□□□□□ -0.41
SMCR2-201ENST00000456090 EVA1BQ9NVM1 165 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 CWC15Q9P013 229 aaKnown RBP12.51□□□□□ -0.41
SMCR2-201ENST00000456090 PNMA8BQ9ULN7 279 aaPredicted RBP12.51□□□□□ -0.41
SMCR2-201ENST00000456090 PCDHB1Q9Y5F3 818 aa12.51□□□□□ -0.41
SMCR2-201ENST00000456090 SYCE3A1L190 88 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 TOR1BO14657 336 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 RIOK3O14730 519 aaKnown RBP12.5□□□□□ -0.41
SMCR2-201ENST00000456090 TLX3O43711 291 aaPredicted RBP12.5□□□□□ -0.41
SMCR2-201ENST00000456090 BRINP1O60477 761 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 GCATO75600 419 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 PRKCGP05129 697 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 MYBL1P10243 752 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 SERPINA4P29622 427 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 EIF4A3P38919 411 aaKnown RBP12.5□□□□□ -0.41
SMCR2-201ENST00000456090 MMP12P39900 470 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 LIG3P49916 1009 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 C1orf61Q13536 156 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 LRRC14Q15048 493 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 SMTNL2Q2TAL5 461 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 WSCD2Q2TBF2 565 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 TDRD12Q587J7 1177 aaKnown RBP12.5□□□□□ -0.41
SMCR2-201ENST00000456090 FAXCQ5TGI0 409 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 CDCP2Q5VXM1 449 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 SRLQ86TD4 932 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 ZSWIM9Q86XI8 627 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 PHACTR4Q8IZ21 702 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 MAPK15Q8TD08 544 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 DEPDC7Q96QD5 511 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 IL12RB2Q99665 862 aa12.5□□□□□ -0.41
SMCR2-201ENST00000456090 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.5□□□□□ -0.41
SMCR2-201ENST00000456090 LRRC61Q9BV99 259 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms