RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 ISG20Q96AZ6 181 aaKnown RBP13.09□□□□□ -0.31
TREX1-203ENST00000456089 HMCESQ96FZ2 354 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 CCDC42Q96M95 316 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 ANP32EQ9BTT0 268 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 WRAP53Q9BUR4 548 aaKnown RBP13.09□□□□□ -0.31
TREX1-203ENST00000456089 SNRNP25Q9BV90 132 aaKnown RBP13.09□□□□□ -0.31
TREX1-203ENST00000456089 C1QTNF2Q9BXJ5 285 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 GPR27Q9NS67 375 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 CTTNBP2NLQ9P2B4 639 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 IPO11Q9UI26 975 aaKnown RBP13.09□□□□□ -0.31
TREX1-203ENST00000456089 PNMA8BQ9ULN7 279 aaPredicted RBP13.09□□□□□ -0.31
TREX1-203ENST00000456089 RAI2Q9Y5P3 530 aa13.09□□□□□ -0.31
TREX1-203ENST00000456089 SPTY2D1-AS1A0A0U1RR47 76 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 ARHGAP42A6NI28 874 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 WASH4PA8MWX3 477 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 RASA4BC9J798 803 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 H3BRJ5 948 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 FPGTO14772 594 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 RASA4O43374 803 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 OPA1O60313 960 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 LRCH4O75427 683 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 PIGNO95427 931 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 CYP1A2P05177 515 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 H2AFZP0C0S5 128 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 CKMT1AP12532 417 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 IGFALSP35858 605 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 NDST2P52849 883 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 RAD51Q06609 339 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 CCDC173Q0VFZ6 552 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 EIF2B5Q13144 721 aaKnown RBP13.08□□□□□ -0.32
TREX1-203ENST00000456089 C1orf61Q13536 156 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 RTP5Q14D33 572 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 SLC18A3Q16572 532 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 CDKN3Q16667 212 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 HADHQ16836 314 aaKnown RBP13.08□□□□□ -0.32
TREX1-203ENST00000456089 CRTC1Q6UUV9 634 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 GDPD4Q6W3E5 623 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 RFX8Q6ZV50 586 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 NYAP1Q6ZVC0 841 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 H2AFVQ71UI9 128 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 PARGQ86W56 976 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 DCBLD1Q8N8Z6 715 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 LMX1AQ8TE12 382 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 CASKIN2Q8WXE0 1202 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 RFFLQ8WZ73 363 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 HSPH1Q92598 858 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 NAF1Q96HR8 494 aaKnown RBP13.08□□□□□ -0.32
TREX1-203ENST00000456089 KCTD15Q96SI1 283 aaPredicted RBP13.08□□□□□ -0.32
TREX1-203ENST00000456089 DNAJC7Q99615 494 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 NRSN2Q9GZP1 204 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 MBNL1Q9NR56 388 aaKnown RBP13.08□□□□□ -0.32
TREX1-203ENST00000456089 ABHD10Q9NUJ1 306 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 NLGN3Q9NZ94 848 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 COQ6Q9Y2Z9 468 aa13.08□□□□□ -0.32
TREX1-203ENST00000456089 FASNP49327 2511 aaKnown RBP13.08□□□□□ -0.32
TREX1-203ENST00000456089 PTPRQQ9UMZ3 2332 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 SSU72P8A0A1W2PR75 194 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 CPED1A4D0V7 1026 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 AKR1B15C9JRZ8 316 aaPredicted RBP13.07□□□□□ -0.32
TREX1-203ENST00000456089 SCAMP1O15126 338 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 TSPAN6O43657 245 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 POP4O95707 220 aaKnown RBP13.07□□□□□ -0.32
TREX1-203ENST00000456089 IGSF6O95976 241 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 CSF2P04141 144 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 PRB1P04280 392 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 MPOP05164 745 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 ALPPL2P10696 532 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 NME1P15531 152 aaKnown RBP13.07□□□□□ -0.32
TREX1-203ENST00000456089 JUNDP17535 347 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 RABIFP47224 123 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 ADKP55263 362 aaKnown RBP13.07□□□□□ -0.32
TREX1-203ENST00000456089 RHOAP61586 193 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 HNRNPKP61978 463 aaKnown RBP eCLIP13.07□□□□□ -0.32
TREX1-203ENST00000456089 E2F1Q01094 437 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 KRT81Q14533 505 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 CA9Q16790 459 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 SMTNL2Q2TAL5 461 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 ZFYVE27Q5T4F4 411 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 GUSBP11Q6P575 273 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 TTC7BQ86TV6 843 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 PLPP6Q8IY26 295 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 UMODL1-AS1Q8N2C9 162 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 ARFGAP1Q8N6T3 406 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 ZNF564Q8TBZ8 553 aaPredicted RBP13.07□□□□□ -0.32
TREX1-203ENST00000456089 IFI44Q8TCB0 444 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 BTBD6Q96KE9 485 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 GDAP1L1Q96MZ0 367 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 PEBP4Q96S96 227 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 LHX3Q9UBR4 397 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 UBA2Q9UBT2 640 aaPredicted RBP13.07□□□□□ -0.32
TREX1-203ENST00000456089 LCMT1Q9UIC8 334 aa13.07□□□□□ -0.32
TREX1-203ENST00000456089 DFFAO00273 331 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 AREL1O15033 823 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 AQP9O43315 295 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 MFAP3LO75121 409 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 CSO75390 466 aaKnown RBP13.06□□□□□ -0.32
TREX1-203ENST00000456089 GCATO75600 419 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 PRKCGP05129 697 aa13.06□□□□□ -0.32
TREX1-203ENST00000456089 CELA2BP08218 269 aaPredicted RBP13.06□□□□□ -0.32
TREX1-203ENST00000456089 TIMP2P16035 220 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms