RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 MFSD1Q9H3U5 465 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 RETREG1Q9H6L5 497 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 SSX2IPQ9Y2D8 614 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 PCDHB7Q9Y5E2 793 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 SLC12A8A0AV02 714 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 RGSL1A5PLK6 1076 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 EPOP01588 193 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 SELPP16109 830 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 SLC26A3P40879 764 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 ELAVL2Q12926 359 aaKnown RBP15.18■□□□□ 0.02
LDLR-202ENST00000455727 LBRQ14739 615 aaKnown RBP15.18■□□□□ 0.02
LDLR-202ENST00000455727 LSM12Q3MHD2 195 aaKnown RBP15.18■□□□□ 0.02
LDLR-202ENST00000455727 SIRPB2Q5JXA9 342 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 SETD3Q86TU7 594 aaPredicted RBP15.18■□□□□ 0.02
LDLR-202ENST00000455727 PGBD5Q8N414 524 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 AGR3Q8TD06 166 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 PXYLP1Q8TE99 480 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 RPRD1AQ96P16 312 aaPredicted RBP15.18■□□□□ 0.02
LDLR-202ENST00000455727 CASD1Q96PB1 797 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 ZNF385DQ9H6B1 395 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 WDR55Q9H6Y2 383 aaPredicted RBP15.18■□□□□ 0.02
LDLR-202ENST00000455727 STARD7Q9NQZ5 370 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 MARCH5Q9NX47 278 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 UXTQ9UBK9 157 aaPredicted RBP15.18■□□□□ 0.02
LDLR-202ENST00000455727 CDH22Q9UJ99 828 aa15.18■□□□□ 0.02
LDLR-202ENST00000455727 LOC100653049A0A140TA62 436 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 AURKAO14965 403 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 PRAMEF11O60813 436 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 KRT34O76011 436 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 ATXN1LP0C7T5 689 aaKnown RBP15.17■□□□□ 0.02
LDLR-202ENST00000455727 ACVR1Q04771 509 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 NSUN2Q08J23 767 aaKnown RBP eCLIP15.17■□□□□ 0.02
LDLR-202ENST00000455727 MGAT5BQ3V5L5 792 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 C5orf22Q49AR2 442 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 TECRLQ5HYJ1 363 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 RBM20Q5T481 1227 aaKnown RBP15.17■□□□□ 0.02
LDLR-202ENST00000455727 KDM1BQ8NB78 822 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 RP9Q8TA86 221 aaKnown RBP15.17■□□□□ 0.02
LDLR-202ENST00000455727 JADE3Q92613 823 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 MOCOSQ96EN8 888 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 UBXN10Q96LJ8 280 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 LENG8Q96PV6 779 aaPredicted RBP15.17■□□□□ 0.02
LDLR-202ENST00000455727 POLR1EQ9GZS1 481 aaKnown RBP15.17■□□□□ 0.02
LDLR-202ENST00000455727 CDYLQ9Y232 598 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 SLC27A5Q9Y2P5 690 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 WASF2Q9Y6W5 498 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 H7C4K7 107 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 ARVCFO00192 962 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 MAP3K7O43318 606 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 SOAT2O75908 522 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 VNN2O95498 520 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 RBP1P09455 135 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 LTA4HP09960 611 aaKnown RBP15.17■□□□□ 0.02
LDLR-202ENST00000455727 OR1E1P30953 314 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 ABL2P42684 1182 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 CCR10P46092 362 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 PFKPQ01813 784 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 CUL3Q13618 768 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 LHX8Q68G74 356 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 KLC3Q6P597 504 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 RNF19BQ6ZMZ0 732 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 ZNF354CQ86Y25 554 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 DEFB107AQ8IZN7 70 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 TXNDC5Q8NBS9 432 aaKnown RBP15.17■□□□□ 0.02
LDLR-202ENST00000455727 FEM1CQ96JP0 617 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 ZNF599Q96NL3 588 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 OLFM1Q99784 485 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 NUF2Q9BZD4 464 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 CRISPLD1Q9H336 500 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 LRCH1Q9Y2L9 728 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 VWA7Q9Y334 891 aa15.17■□□□□ 0.02
LDLR-202ENST00000455727 GOLGA8QA0A0J9YX86 632 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 GOLGA8OA6NCC3 632 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 TRPC5OSA6NMA1 111 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 GOLGA8NF8WBI6 632 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 LDB2O43679 373 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 HLA-DPA1P20036 260 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 PIK3R1P27986 724 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 EPHA3P29320 983 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 PPARGP37231 505 aaPredicted RBP15.16■□□□□ 0.02
LDLR-202ENST00000455727 ARPP19P56211 112 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 NOGQ13253 232 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 ACAP2Q15057 778 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 ZNF789Q5FWF6 425 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 TRIM68Q6AZZ1 485 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 FUT10Q6P4F1 479 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 RSPO2Q6UXX9 243 aaPredicted RBP15.16■□□□□ 0.02
LDLR-202ENST00000455727 TRIM67Q6ZTA4 783 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 FBXW8Q8N3Y1 598 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 SPATA6LQ8N4H0 392 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 MAELQ96JY0 434 aaKnown RBP15.16■□□□□ 0.02
LDLR-202ENST00000455727 B3GALT6Q96L58 329 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 CEP295NLQ96MC4 621 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 CDK5RAP1Q96SZ6 601 aaKnown RBP15.16■□□□□ 0.02
LDLR-202ENST00000455727 SEPT5Q99719 369 aaPredicted RBP15.16■□□□□ 0.02
LDLR-202ENST00000455727 WISP3O95389 354 aaPredicted RBP15.16■□□□□ 0.02
LDLR-202ENST00000455727 S1PR4O95977 384 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 PENKP01210 267 aaPredicted RBP15.16■□□□□ 0.02
LDLR-202ENST00000455727 FGF1P05230 155 aa15.16■□□□□ 0.02
LDLR-202ENST00000455727 TACR2P21452 398 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms