RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 MYRIPQ8NFW9 859 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 PIH1D2Q8WWB5 315 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 LYSMD1Q96S90 227 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 SRPK1Q96SB4 655 aaKnown RBP11.35□□□□□ -0.59
TRAF4-206ENST00000454852 C19orf43Q9BQ61 176 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 TBL1YQ9BQ87 522 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 RHOXF2Q9BQY4 288 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 ADGRE3Q9BY15 652 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 DPH5Q9H2P9 285 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 DLGAP2Q9P1A6 1054 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 ANAPC5Q9UJX4 755 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 RAB21Q9UL25 225 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 SCML1Q9UN30 329 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 PCDHGC4Q9Y5F7 938 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 NCOR1O75376 2440 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 ANKRD36A6QL64 1941 aa11.35□□□□□ -0.59
TRAF4-206ENST00000454852 ESYT3A0FGR9 886 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 ANKRD66B4E2M5 251 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 E7ESA3 106 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 C1QTNF3-AMACRE9PGA6 284 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 LEFTY1O75610 366 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 ADH1BP00325 375 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 AOC1P19801 751 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 COL9A1P20849 921 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 C5AR1P21730 350 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 CLCN5P51795 746 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 DGKEP52429 567 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 POLR2LP62875 67 aaKnown RBP11.34□□□□□ -0.59
TRAF4-206ENST00000454852 SATB1Q01826 763 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 CDH17Q12864 832 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 TRADDQ15628 312 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 ARSIQ5FYB1 569 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 ARMC12Q5T9G4 340 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 ZNF776Q68DI1 518 aaPredicted RBP11.34□□□□□ -0.59
TRAF4-206ENST00000454852 KIAA1211LQ6NV74 962 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 PKN3Q6P5Z2 889 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 TMEM92Q6UXU6 159 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 Q6ZS52 159 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 BMP8AQ7Z5Y6 402 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 CAND1Q86VP6 1230 aaKnown RBP11.34□□□□□ -0.59
TRAF4-206ENST00000454852 RELL1Q8IUW5 271 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 RYBPQ8N488 228 aaPredicted RBP11.34□□□□□ -0.59
TRAF4-206ENST00000454852 ZCCHC9Q8N567 271 aaKnown RBP11.34□□□□□ -0.59
TRAF4-206ENST00000454852 IPMKQ8NFU5 416 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 OR6K2Q8NGY2 324 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 PIP4K2CQ8TBX8 421 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 FBXO25Q8TCJ0 367 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 PPP1R16AQ96I34 528 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 SERPINB12Q96P63 405 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 MCCC1Q96RQ3 725 aaPredicted RBP11.34□□□□□ -0.59
TRAF4-206ENST00000454852 FSD1LQ9BXM9 530 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 HDAC8Q9BY41 377 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 TRIM31Q9BZY9 425 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 TSPYL1Q9H0U9 437 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 ZDHHC6Q9H6R6 413 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 ZDHHC4Q9NPG8 344 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 UBP1Q9NZI7 540 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 SARDHQ9UL12 918 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 PHTF1Q9UMS5 762 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 SIT1Q9Y3P8 196 aa11.34□□□□□ -0.59
TRAF4-206ENST00000454852 TECTAO75443 2155 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 A0A0J9YYE9 177 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 EIF3HO15372 352 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRAF4-206ENST00000454852 RNASEH1O60930 286 aaKnown RBP11.33□□□□□ -0.6
TRAF4-206ENST00000454852 PIGNO95427 931 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 AGTP01019 485 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 TRBC1P01850 177 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 UGT2B4P06133 528 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 PDHA1P08559 390 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 GKP32189 559 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 WASP42768 502 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 NPY2RP49146 381 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 LMAN1P49257 510 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 CARSP49589 748 aaKnown RBP11.33□□□□□ -0.6
TRAF4-206ENST00000454852 RPS14P62263 151 aaKnown RBP11.33□□□□□ -0.6
TRAF4-206ENST00000454852 CST6Q15828 149 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 QPCTQ16769 361 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 KCTD19Q17RG1 926 aaPredicted RBP11.33□□□□□ -0.6
TRAF4-206ENST00000454852 SIRPB2Q5JXA9 342 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 CEP128Q6ZU80 1094 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 ZSWIM9Q86XI8 627 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 RAVER1Q8IY67 606 aaKnown RBP11.33□□□□□ -0.6
TRAF4-206ENST00000454852 NDUFAF2Q8N183 169 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 TAB3Q8N5C8 712 aaPredicted RBP11.33□□□□□ -0.6
TRAF4-206ENST00000454852 GRIN3AQ8TCU5 1115 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 RAB7BQ96AH8 199 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 LRRC39Q96DD0 335 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 IFT43Q96FT9 208 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 KLHL32Q96NJ5 620 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 RANBP9Q96S59 729 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 FICDQ9BVA6 458 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 MKRN2Q9H000 416 aaKnown RBP11.33□□□□□ -0.6
TRAF4-206ENST00000454852 POLMQ9NP87 494 aaPredicted RBP11.33□□□□□ -0.6
TRAF4-206ENST00000454852 PCDHB9Q9Y5E1 797 aa11.33□□□□□ -0.6
TRAF4-206ENST00000454852 BDP1A6H8Y1 2624 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 TMEM221A6NGB7 291 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 C16orf96A6NNT2 1141 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 F5H423 210 aaPredicted RBP11.32□□□□□ -0.6
TRAF4-206ENST00000454852 M0R296 226 aa11.32□□□□□ -0.6
TRAF4-206ENST00000454852 AREL1O15033 823 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms