RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 POTEHQ6S545 545 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 CDH24Q86UP0 819 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 OSGEPL1Q9H4B0 414 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 FAM50BQ9Y247 325 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 SF3B1O75533 1304 aaKnown RBP eCLIP12.12□□□□□ -0.474e-7■■■■■ 122.3
SEC16A-207ENST00000453963 TCEA3O75764 348 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 C2P06681 752 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 PAICSP22234 425 aaKnown RBP12.12□□□□□ -0.47
SEC16A-207ENST00000453963 GPR15P49685 360 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 BEX3Q00994 111 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 KCTD19Q17RG1 926 aaPredicted RBP12.12□□□□□ -0.47
SEC16A-207ENST00000453963 FGD3Q5JSP0 725 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 CELF3Q5SZQ8 465 aaKnown RBP12.12□□□□□ -0.47
SEC16A-207ENST00000453963 CDC73Q6P1J9 531 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 MTSS1LQ765P7 747 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 CMC1Q7Z7K0 106 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 SYT12Q8IV01 421 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 CDK20Q8IZL9 346 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 DSELQ8IZU8 1212 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 CNTD1Q8N815 330 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 ANKRD52Q8NB46 1076 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 GINS4Q9BRT9 223 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 MRPL9Q9BYD2 267 aaKnown RBP12.12□□□□□ -0.47
SEC16A-207ENST00000453963 RNF208Q9H0X6 261 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 PCDH18Q9HCL0 1135 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 VPS45Q9NRW7 570 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 VPS51Q9UID3 782 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 TNFRSF21O75509 655 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 CST1P01037 141 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 IL6P05231 212 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 ITGB6P18564 788 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 DGKAP23743 735 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 NDUFA5Q16718 116 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 GAD1Q99259 594 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 ARMC7Q9H6L4 198 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 MAGEL2Q9UJ55 1249 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 MYPNQ86TC9 1320 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 NRCAMQ92823 1304 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 STX11O75558 287 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 CLTBP09497 229 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 IL12AP29459 219 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 HPCAL1P37235 193 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 ASTE1Q2TB18 679 aaPredicted RBP12.12□□□□□ -0.47
SEC16A-207ENST00000453963 CXCL17Q6UXB2 119 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 REPS1Q96D71 796 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 LGMNQ99538 433 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 NPAS2Q99743 824 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 OSBPL6Q9BZF3 934 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 PNPLA8Q9NP80 782 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 DNAJB4Q9UDY4 337 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 OR56A5P0C7T3 313 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 DBTP11182 482 aaKnown RBP12.11□□□□□ -0.47
SEC16A-207ENST00000453963 FGFR1P11362 822 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 CCNB1P14635 433 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 HNRNPLP14866 589 aaKnown RBP eCLIP12.11□□□□□ -0.47
SEC16A-207ENST00000453963 GOT1P17174 413 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 NPR3P17342 541 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 YWHAQP27348 245 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 NUP62P37198 522 aaPredicted RBP12.11□□□□□ -0.47
SEC16A-207ENST00000453963 IFNGR2P38484 337 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 ATP6V0D1P61421 351 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 DENND5AQ6IQ26 1287 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 ZCCHC8Q6NZY4 707 aaKnown RBP12.11□□□□□ -0.47
SEC16A-207ENST00000453963 DRICH1Q6PGQ1 229 aaPredicted RBP12.11□□□□□ -0.47
SEC16A-207ENST00000453963 TXNDC11Q6PKC3 985 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 JOSD2Q8TAC2 188 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 HELQQ8TDG4 1101 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 LENG9Q96B70 501 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 ADAM2Q99965 735 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 WDR55Q9H6Y2 383 aaPredicted RBP12.11□□□□□ -0.47
SEC16A-207ENST00000453963 NOL11Q9H8H0 719 aaKnown RBP12.11□□□□□ -0.47
SEC16A-207ENST00000453963 ABCC13Q9NSE7 274 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 TMEM39AQ9NV64 488 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 KLQ9UEF7 1012 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 NADKO95544 446 aaPredicted RBP12.11□□□□□ -0.47
SEC16A-207ENST00000453963 NFICP08651 508 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 USP17L7P0C7H9 530 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 SLURP2P0DP57 97 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 PTPN1P18031 435 aaKnown RBP12.11□□□□□ -0.47
SEC16A-207ENST00000453963 CDKN2BP42772 138 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 LSM3P62310 102 aaKnown RBP12.11□□□□□ -0.47
SEC16A-207ENST00000453963 SLC9A5Q14940 896 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 MTX3Q5HYI7 312 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 KIAA0408Q6ZU52 694 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 PDPRQ8NCN5 879 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 PROX1Q92786 737 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 COPS5Q92905 334 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 ACO2Q99798 780 aaKnown RBP12.11□□□□□ -0.47
SEC16A-207ENST00000453963 SENP6Q9GZR1 1112 aaPredicted RBP12.11□□□□□ -0.47
SEC16A-207ENST00000453963 TAS2R1Q9NYW7 299 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.11□□□□□ -0.471e-6■■□□□ 12.4
SEC16A-207ENST00000453963 TRAF6Q9Y4K3 522 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 SNCAIPQ9Y6H5 919 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 BCLAF3A2AJT9 711 aaKnown RBP12.11□□□□□ -0.47
SEC16A-207ENST00000453963 BMP10O95393 424 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 ERCC2P18074 760 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 PTPN3P26045 913 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 SLC26A3P40879 764 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 PLCL1Q15111 1095 aa12.11□□□□□ -0.47
SEC16A-207ENST00000453963 PSMD5Q16401 504 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms