RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 K7ERI5 159 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 FGF10O15520 208 aaPredicted RBP5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 AQP9O43315 295 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 ATP2C2O75185 946 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 CEACAM4O75871 244 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 RTN3O95197 1032 aaPredicted RBP5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 KLKB1P03952 638 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 RPLP0P05388 317 aaKnown RBP5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 INHBBP09529 407 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 HNRNPH3P31942 346 aaKnown RBP5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 DRD3P35462 400 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 CD96P40200 585 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 LIFRP42702 1097 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 MEOX1P50221 254 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 PGDP52209 483 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 COPB1P53618 953 aaKnown RBP5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 TSPY1Q01534 308 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 TRDNQ13061 729 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 PTK2BQ14289 1009 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 CST6Q15828 149 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 PFKFB3Q16875 520 aaPredicted RBP5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 ARHGAP44Q17R89 818 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 POM121L1PQ3SYA9 428 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 E4F1Q66K89 784 aaPredicted RBP5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 DUS1LQ6P1R4 473 aaKnown RBP5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 CASC1Q6TDU7 716 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 ANKS1BQ7Z6G8 1248 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 ABI3BPQ7Z7G0 1075 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 TRIM69Q86WT6 500 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 METTL23Q86XA0 190 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 LILRA2Q8N149 483 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 NXPE1Q8N323 547 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 TMTC2Q8N394 836 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 SDR16C5Q8N3Y7 309 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 MCPH1Q8NEM0 835 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 OR14C36Q8NHC7 312 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 DEPTORQ8TB45 409 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 TBCKQ8TEA7 893 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 GANCQ8TET4 914 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 BTN2A2Q8WVV5 523 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 HVCN1Q96D96 273 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 MAP6Q96JE9 813 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 PTCHD1Q96NR3 888 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 HAPLN3Q96S86 360 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 MTA3Q9BTC8 594 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 EFHD1Q9BUP0 239 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 CIPCQ9C0C6 399 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 INTS2Q9H0H0 1204 aaKnown RBP5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 IL25Q9H293 177 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 CCM2LQ9NUG4 571 aaPredicted RBP5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 SLAMF8Q9P0V8 285 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 CHORDC1Q9UHD1 332 aaPredicted RBP5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 PFDN2Q9UHV9 154 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 NAALADL1Q9UQQ1 740 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 GPR55Q9Y2T6 319 aaPredicted RBP5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 RNF215Q9Y6U7 377 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 PCLOQ9Y6V0 5065 aa5.42□□□□□ -1.54
SBDSP1-204ENST00000453858 TBC1D3DA0A087WVF3 549 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 TBC1D3IA0A087WXS9 549 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 TBC1D3EA0A087X179 549 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 TBC1D3KA0A087X1G2 549 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 A0A1B0GUH1 482 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 TBC1D3FA6NER0 549 aaPredicted RBP5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 TBC1D3LB9A6J9 549 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 LMO7DNF2Z398 122 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 BIN1O00499 593 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 E2F3O00716 465 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 GABRDO14764 452 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 YY2O15391 372 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 PAX4O43316 350 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 MSI1O43347 362 aaKnown RBP5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 HCRTO43612 131 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 FAM189A1O60320 539 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 USO1O60763 962 aaKnown RBP5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 TBX18O95935 607 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 ZGLP1P0C6A0 271 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 TBC1D3HP0C7X1 549 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 PABPC1P11940 636 aaKnown RBP5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 PAMP19021 973 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 PDCP20941 246 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 ACAT1P24752 427 aaKnown RBP5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 MAT2AP31153 395 aaKnown RBP5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 SLC8A1P32418 973 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 RBMXP38159 391 aaKnown RBP5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 TXKP42681 527 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 TUBP50607 506 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 CACNA2D1P54289 1103 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 GFRA1P56159 465 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 ABHD18Q0P651 414 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 ZNF235Q14590 738 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 CDSNQ15517 529 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 DPY19L1Q2PZI1 675 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 HECTD3Q5T447 861 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 C9orf64Q5T6V5 341 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 ACBD5Q5T8D3 534 aaPredicted RBP5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 TBC1D3GQ6DHY5 549 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 TBC1D3CQ6IPX1 549 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 MOXD1Q6UVY6 613 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 MPZL3Q6UWV2 235 aa5.41□□□□□ -1.54
SBDSP1-204ENST00000453858 VSTM1Q6UX27 236 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms