RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 IVLP07476 585 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 BMP1P13497 986 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 ALADP13716 330 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 POLR2EP19388 210 aaKnown RBP6.05□□□□□ -1.44
SDC4P-201ENST00000453285 HLA-DPA1P20036 260 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 PSMA3P25788 255 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 ARNTP27540 789 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 GKP32189 559 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 STX2P32856 288 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 GJA4P35212 333 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 ARCN1P48444 511 aaKnown RBP6.05□□□□□ -1.44
SDC4P-201ENST00000453285 DGKGP49619 791 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 AP1S1P61966 158 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 HTR4Q13639 388 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 GALNT3Q14435 633 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 POU6F1Q14863 301 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 DLG2Q15700 870 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 QPCTQ16769 361 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 PTPRNQ16849 979 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 HSP90B2PQ58FF3 399 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 TEDDM1Q5T9Z0 273 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 NAIF1Q69YI7 327 aaPredicted RBP6.05□□□□□ -1.44
SDC4P-201ENST00000453285 ESRP1Q6NXG1 681 aaKnown RBP6.05□□□□□ -1.44
SDC4P-201ENST00000453285 CASC4Q6P4E1 433 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 C22orf39Q6P5X5 142 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 ZNF449Q6P9G9 518 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 EP400NLQ6ZTU2 488 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 MICALCLQ6ZW33 695 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 MARK2Q7KZI7 788 aaKnown RBP6.05□□□□□ -1.44
SDC4P-201ENST00000453285 EXOC3L1Q86VI1 746 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 SFTPA1Q8IWL2 248 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 MICALL1Q8N3F8 863 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 PCDH20Q8N6Y1 951 aaKnown RBP6.05□□□□□ -1.44
SDC4P-201ENST00000453285 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.05□□□□□ -1.44
SDC4P-201ENST00000453285 OR2AP1Q8NGE2 309 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 WFIKKN2Q8TEU8 576 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 FRS2Q8WU20 508 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 CYB5D2Q8WUJ1 264 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 PTCD2Q8WV60 388 aaKnown RBP6.05□□□□□ -1.44
SDC4P-201ENST00000453285 PIH1D2Q8WWB5 315 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 SORCS1Q8WY21 1168 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 ZNF669Q96BR6 464 aaPredicted RBP6.05□□□□□ -1.44
SDC4P-201ENST00000453285 IFT43Q96FT9 208 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 CERS2Q96G23 380 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 FAM161BQ96MY7 647 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 NECTIN4Q96NY8 510 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 SMIM14Q96QK8 99 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 CYTH2Q99418 400 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 PAFAH2Q99487 392 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 CPEB1Q9BZB8 566 aaKnown RBP6.05□□□□□ -1.44
SDC4P-201ENST00000453285 TM6SF2Q9BZW4 377 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 CEP44Q9C0F1 390 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 TNKS2Q9H2K2 1166 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 PPCSQ9HAB8 311 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 GTSE1Q9NYZ3 720 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 IL1RAPL1Q9NZN1 696 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 BCCIPQ9P287 314 aaKnown RBP eCLIP6.05□□□□□ -1.44
SDC4P-201ENST00000453285 SLC2A6Q9UGQ3 507 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 EVLQ9UI08 416 aaPredicted RBP6.05□□□□□ -1.44
SDC4P-201ENST00000453285 SLC25A13Q9UJS0 675 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 HCN2Q9UL51 889 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 ARIH1Q9Y4X5 557 aaPredicted RBP6.05□□□□□ -1.44
SDC4P-201ENST00000453285 KCTD3Q9Y597 815 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 SPO11Q9Y5K1 396 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 RAI2Q9Y5P3 530 aa6.05□□□□□ -1.44
SDC4P-201ENST00000453285 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.04□□□□□ -1.44
SDC4P-201ENST00000453285 A0A1W2PPM1 405 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 CCDC78A2IDD5 438 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 HEATR9A2RTY3 570 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 HMX2A2RU54 273 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 ANTXRLA6NF34 631 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 GOLGA6L10A6NI86 522 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 TTC34A8MYJ7 566 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 ANKRD66B4E2M5 251 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 WASH3PC4AMC7 463 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 H3BQ06 376 aaPredicted RBP6.04□□□□□ -1.44
SDC4P-201ENST00000453285 AURKAO14965 403 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 POLR3GO15318 223 aaPredicted RBP6.04□□□□□ -1.44
SDC4P-201ENST00000453285 MBTPS2O43462 519 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 SOCS5O75159 536 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 SIN3BO75182 1162 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 PGLSO95336 258 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 PAPSS2O95340 614 aaPredicted RBP6.04□□□□□ -1.44
SDC4P-201ENST00000453285 PIGNO95427 931 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 IGSF6O95976 241 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 ASLP04424 464 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 PRKCGP05129 697 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 SRPRAP08240 638 aaKnown RBP6.04□□□□□ -1.44
SDC4P-201ENST00000453285 DLDP09622 509 aaKnown RBP6.04□□□□□ -1.44
SDC4P-201ENST00000453285 PIRTP0C851 137 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 ERVK-10P10266 1014 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 CREB1P16220 341 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 GDI1P31150 447 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 SLC8A1P32418 973 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 MSH2P43246 934 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 GYS2P54840 703 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 MAGOHP61326 146 aaKnown RBP6.04□□□□□ -1.44
SDC4P-201ENST00000453285 SNRPD1P62314 119 aaKnown RBP6.04□□□□□ -1.44
SDC4P-201ENST00000453285 ACVR1Q04771 509 aa6.04□□□□□ -1.44
SDC4P-201ENST00000453285 MGAT5Q09328 741 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms