RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 RHOT2Q8IXI1 618 aa21.91■■□□□ 1.1
C9orf3-208ENST00000451893 ZNF592Q92610 1267 aa21.91■■□□□ 1.1
C9orf3-208ENST00000451893 ZNF653Q96CK0 615 aa21.91■■□□□ 1.1
C9orf3-208ENST00000451893 GPATCH2LQ9NWQ4 482 aa21.91■■□□□ 1.1
C9orf3-208ENST00000451893 PCSK1NQ9UHG2 260 aa21.91■■□□□ 1.1
C9orf3-208ENST00000451893 SCINQ9Y6U3 715 aa21.91■■□□□ 1.1
C9orf3-208ENST00000451893 AKAP13Q12802 2813 aa21.9■■□□□ 1.1
C9orf3-208ENST00000451893 TCRBV5S1A1TA0A578 114 aa21.9■■□□□ 1.1
C9orf3-208ENST00000451893 ARHGAP42A6NI28 874 aa21.9■■□□□ 1.1
C9orf3-208ENST00000451893 DGKAP23743 735 aa21.9■■□□□ 1.1
C9orf3-208ENST00000451893 ABL2P42684 1182 aa21.9■■□□□ 1.1
C9orf3-208ENST00000451893 THOP1P52888 689 aa21.9■■□□□ 1.1
C9orf3-208ENST00000451893 CYP4F3Q08477 520 aa21.9■■□□□ 1.1
C9orf3-208ENST00000451893 MAMLD1Q13495 774 aa21.9■■□□□ 1.1
C9orf3-208ENST00000451893 PDE1CQ14123 709 aaPredicted RBP21.9■■□□□ 1.1
C9orf3-208ENST00000451893 ZNF542PQ5EBM4 170 aa21.9■■□□□ 1.1
C9orf3-208ENST00000451893 PPP1R15BQ5SWA1 713 aa21.9■■□□□ 1.1
C9orf3-208ENST00000451893 HES3Q5TGS1 186 aa21.9■■□□□ 1.1
C9orf3-208ENST00000451893 ABI3BPQ7Z7G0 1075 aa21.9■■□□□ 1.1
C9orf3-208ENST00000451893 NXPE2Q96DL1 559 aa21.9■■□□□ 1.1
C9orf3-208ENST00000451893 CNOT8Q9UFF9 292 aaKnown RBP21.9■■□□□ 1.1
C9orf3-208ENST00000451893 ITM2BQ9Y287 266 aa21.9■■□□□ 1.1
C9orf3-208ENST00000451893 DUSP10Q9Y6W6 482 aa21.9■■□□□ 1.1
C9orf3-208ENST00000451893 SIGLEC6O43699 453 aa21.89■■□□□ 1.09
C9orf3-208ENST00000451893 PIAS2O75928 621 aa21.89■■□□□ 1.09
C9orf3-208ENST00000451893 HADHBP55084 474 aaKnown RBP21.89■■□□□ 1.09
C9orf3-208ENST00000451893 ZNF211Q13398 564 aaPredicted RBP21.89■■□□□ 1.09
C9orf3-208ENST00000451893 SERINC3Q13530 473 aa21.89■■□□□ 1.09
C9orf3-208ENST00000451893 PPP6R3Q5H9R7 873 aaPredicted RBP21.89■■□□□ 1.09
C9orf3-208ENST00000451893 LRRC73Q5JTD7 316 aa21.89■■□□□ 1.09
C9orf3-208ENST00000451893 ERMARDQ5T6L9 678 aa21.89■■□□□ 1.09
C9orf3-208ENST00000451893 PARGQ86W56 976 aa21.89■■□□□ 1.09
C9orf3-208ENST00000451893 SLC35F6Q8N357 371 aa21.89■■□□□ 1.09
C9orf3-208ENST00000451893 NETO2Q8NC67 525 aa21.89■■□□□ 1.09
C9orf3-208ENST00000451893 RFFLQ8WZ73 363 aa21.89■■□□□ 1.09
C9orf3-208ENST00000451893 IFT43Q96FT9 208 aa21.89■■□□□ 1.09
C9orf3-208ENST00000451893 CELF6Q96J87 481 aaKnown RBP21.89■■□□□ 1.09
C9orf3-208ENST00000451893 EXOC2Q96KP1 924 aa21.89■■□□□ 1.09
C9orf3-208ENST00000451893 WDR24Q96S15 920 aa21.89■■□□□ 1.09
C9orf3-208ENST00000451893 NAPGQ99747 312 aaPredicted RBP21.89■■□□□ 1.09
C9orf3-208ENST00000451893 SP110Q9HB58 689 aa21.89■■□□□ 1.09
C9orf3-208ENST00000451893 MRPL47Q9HD33 250 aaKnown RBP21.89■■□□□ 1.09
C9orf3-208ENST00000451893 TRIM10Q9UDY6 481 aa21.89■■□□□ 1.09
C9orf3-208ENST00000451893 LHX6Q9UPM6 363 aa21.89■■□□□ 1.09
C9orf3-208ENST00000451893 JRKLQ9Y4A0 524 aa21.89■■□□□ 1.09
C9orf3-208ENST00000451893 AK5Q9Y6K8 562 aa21.89■■□□□ 1.09
C9orf3-208ENST00000451893 MACROD2A1Z1Q3 448 aa21.88■■□□□ 1.09
C9orf3-208ENST00000451893 WASH4PA8MWX3 477 aa21.88■■□□□ 1.09
C9orf3-208ENST00000451893 TM7SF2O76062 418 aa21.88■■□□□ 1.09
C9orf3-208ENST00000451893 NAP1L1P55209 391 aaKnown RBP21.88■■□□□ 1.09
C9orf3-208ENST00000451893 OGDHQ02218 1023 aa21.88■■□□□ 1.09
C9orf3-208ENST00000451893 PTK2BQ14289 1009 aa21.88■■□□□ 1.09
C9orf3-208ENST00000451893 GRM3Q14832 879 aa21.88■■□□□ 1.09
C9orf3-208ENST00000451893 DNAAF5Q86Y56 855 aa21.88■■□□□ 1.09
C9orf3-208ENST00000451893 UMODL1-AS1Q8N2C9 162 aa21.88■■□□□ 1.09
C9orf3-208ENST00000451893 DENND6BQ8NEG7 585 aa21.88■■□□□ 1.09
C9orf3-208ENST00000451893 OR4C6Q8NH72 309 aa21.88■■□□□ 1.09
C9orf3-208ENST00000451893 DUSP23Q9BVJ7 150 aa21.88■■□□□ 1.09
C9orf3-208ENST00000451893 PACSIN1Q9BY11 444 aa21.88■■□□□ 1.09
C9orf3-208ENST00000451893 UCKL1Q9NWZ5 548 aa21.88■■□□□ 1.09
C9orf3-208ENST00000451893 GGT7Q9UJ14 662 aa21.88■■□□□ 1.09
C9orf3-208ENST00000451893 RALYQ9UKM9 306 aaKnown RBP21.88■■□□□ 1.09
C9orf3-208ENST00000451893 POM121BA6NF01 834 aa21.87■■□□□ 1.09
C9orf3-208ENST00000451893 DFFAO00273 331 aa21.87■■□□□ 1.09
C9orf3-208ENST00000451893 DUSP3P51452 185 aaPredicted RBP21.87■■□□□ 1.09
C9orf3-208ENST00000451893 NDST2P52849 883 aa21.87■■□□□ 1.09
C9orf3-208ENST00000451893 CLDN6P56747 220 aa21.87■■□□□ 1.09
C9orf3-208ENST00000451893 ELP6Q0PNE2 266 aa21.87■■□□□ 1.09
C9orf3-208ENST00000451893 PLEKHA7Q6IQ23 1121 aa21.87■■□□□ 1.09
C9orf3-208ENST00000451893 ERAP2Q6P179 960 aa21.87■■□□□ 1.09
C9orf3-208ENST00000451893 SYCE1Q8N0S2 351 aa21.87■■□□□ 1.09
C9orf3-208ENST00000451893 SLC22A18ASQ8N1D0 253 aa21.87■■□□□ 1.09
C9orf3-208ENST00000451893 WRAP53Q9BUR4 548 aaKnown RBP21.87■■□□□ 1.09
C9orf3-208ENST00000451893 SNRNP25Q9BV90 132 aaKnown RBP21.87■■□□□ 1.09
C9orf3-208ENST00000451893 CINPQ9BW66 212 aaPredicted RBP21.87■■□□□ 1.09
C9orf3-208ENST00000451893 KLC2Q9H0B6 622 aa21.87■■□□□ 1.09
C9orf3-208ENST00000451893 NOL6Q9H6R4 1146 aaKnown RBP21.87■■□□□ 1.09
C9orf3-208ENST00000451893 TFR2Q9UP52 801 aa21.87■■□□□ 1.09
C9orf3-208ENST00000451893 RAXQ9Y2V3 346 aa21.87■■□□□ 1.09
C9orf3-208ENST00000451893 TAF4O00268 1085 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 TRIM38O00635 465 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 RAD51BO15315 384 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 MMP20O60882 483 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 PALMO75781 387 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 MTA2O94776 668 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 PIGNO95427 931 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 ACP1P24666 158 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 NOP2P46087 812 aaKnown RBP21.86■■□□□ 1.09
C9orf3-208ENST00000451893 TERF1P54274 439 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 E2F1Q01094 437 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 FGL2Q14314 439 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 C19orf48Q6RUI8 117 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 KANSL1Q7Z3B3 1105 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 SLC25A45Q8N413 288 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 TSC1Q92574 1164 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 BMFQ96LC9 184 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 LENG8Q96PV6 779 aaPredicted RBP21.86■■□□□ 1.09
C9orf3-208ENST00000451893 C1QTNF2Q9BXJ5 285 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 ABCG4Q9H172 646 aa21.86■■□□□ 1.09
C9orf3-208ENST00000451893 ZWILCHQ9H900 591 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms