RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 TP53I13Q8NBR0 393 aaPredicted RBP10.28□□□□□ -0.76
LINC01004-202ENST00000450686 OR2AP1Q8NGE2 309 aa10.28□□□□□ -0.76
LINC01004-202ENST00000450686 PCDH19Q8TAB3 1148 aa10.28□□□□□ -0.76
LINC01004-202ENST00000450686 FAM172AQ8WUF8 416 aa10.28□□□□□ -0.76
LINC01004-202ENST00000450686 TTC9Q92623 222 aa10.28□□□□□ -0.76
LINC01004-202ENST00000450686 TBC1D31Q96DN5 1066 aa10.28□□□□□ -0.76
LINC01004-202ENST00000450686 IFT43Q96FT9 208 aa10.28□□□□□ -0.76
LINC01004-202ENST00000450686 HMCESQ96FZ2 354 aa10.28□□□□□ -0.76
LINC01004-202ENST00000450686 BOCQ9BWV1 1114 aa10.28□□□□□ -0.76
LINC01004-202ENST00000450686 NLRC4Q9NPP4 1024 aa10.28□□□□□ -0.76
LINC01004-202ENST00000450686 THSD1Q9NS62 852 aa10.28□□□□□ -0.76
LINC01004-202ENST00000450686 TMEM248Q9NWD8 314 aa10.28□□□□□ -0.76
LINC01004-202ENST00000450686 PPARGC1AQ9UBK2 798 aaKnown RBP10.28□□□□□ -0.76
LINC01004-202ENST00000450686 SPASTQ9UBP0 616 aa10.28□□□□□ -0.76
LINC01004-202ENST00000450686 SCN8AQ9UQD0 1980 aa10.28□□□□□ -0.76
LINC01004-202ENST00000450686 FLNCQ14315 2725 aa10.27□□□□□ -0.76
LINC01004-202ENST00000450686 EME2A4GXA9 379 aaPredicted RBP10.27□□□□□ -0.77
LINC01004-202ENST00000450686 C2CD4BA6NLJ0 364 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 RAMP2O60895 175 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 LSM8O95777 96 aaKnown RBP10.27□□□□□ -0.77
LINC01004-202ENST00000450686 GSRP00390 522 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 ANXA6P08133 673 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 SDC4P31431 198 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 RFC1P35251 1148 aaPredicted RBP10.27□□□□□ -0.77
LINC01004-202ENST00000450686 EIF4A3P38919 411 aaKnown RBP10.27□□□□□ -0.77
LINC01004-202ENST00000450686 GCGRP47871 477 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 ERVPABLB-1P60509 514 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 POLR2FP61218 127 aaKnown RBP10.27□□□□□ -0.77
LINC01004-202ENST00000450686 UBE2HP62256 183 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 SNRPD1P62314 119 aaKnown RBP10.27□□□□□ -0.77
LINC01004-202ENST00000450686 CCL7P80098 99 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 SLC20A2Q08357 652 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 VAC14Q08AM6 782 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 PTP4A2Q12974 167 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 CLN3Q13286 438 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 POLD3Q15054 466 aaPredicted RBP10.27□□□□□ -0.77
LINC01004-202ENST00000450686 ALG11Q2TAA5 492 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 SCYL2Q6P3W7 929 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 ZSWIM9Q86XI8 627 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 DCP2Q8IU60 420 aaKnown RBP10.27□□□□□ -0.77
LINC01004-202ENST00000450686 SDR16C5Q8N3Y7 309 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 CXorf40AQ8TE69 158 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 CCDC74AQ96AQ1 378 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 ISG20Q96AZ6 181 aaKnown RBP10.27□□□□□ -0.77
LINC01004-202ENST00000450686 SLC46A1Q96NT5 459 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 LENG8Q96PV6 779 aaPredicted RBP10.27□□□□□ -0.77
LINC01004-202ENST00000450686 STK33Q9BYT3 514 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 TRIM4Q9C037 500 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 VPS16Q9H269 839 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 CLSTN2Q9H4D0 955 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 EPB41L5Q9HCM4 733 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 FAM207AQ9NSI2 230 aaPredicted RBP10.27□□□□□ -0.77
LINC01004-202ENST00000450686 GPATCH2LQ9NWQ4 482 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 LHX3Q9UBR4 397 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 OR1A2Q9Y585 309 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 CSNK1G3Q9Y6M4 447 aa10.27□□□□□ -0.77
LINC01004-202ENST00000450686 ARHGEF17Q96PE2 2063 aaPredicted RBP10.27□□□□□ -0.77
LINC01004-202ENST00000450686 PTPN13Q12923 2485 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 CDRT15L2A8MXV6 281 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 LMO7DNF2Z398 122 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 J3QKU1 62 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 EFSO43281 561 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 CCP110O43303 1012 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 KDELR3O43731 214 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 CREB3O43889 395 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 TM7SF2O76062 418 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 POP4O95707 220 aaKnown RBP10.26□□□□□ -0.77
LINC01004-202ENST00000450686 CYP1A1P04798 512 aaPredicted RBP10.26□□□□□ -0.77
LINC01004-202ENST00000450686 PCCBP05166 539 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 MMP8P22894 467 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 RGRP47804 291 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 MAPKAPK2P49137 400 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 RHOAP61586 193 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 SKOR1P84550 965 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 NFKB2Q00653 900 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 CDR2Q01850 454 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 SPIDRQ14159 915 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 CYTH1Q15438 398 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 WSCD2Q2TBF2 565 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 MACC1Q6ZN28 852 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 DNAAF5Q86Y56 855 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 JAMLQ86YT9 394 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 FAM114A1Q8IWE2 563 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 LSMEM2Q8N112 164 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 Q8N9G6 341 aaPredicted RBP10.26□□□□□ -0.77
LINC01004-202ENST00000450686 PLA2G15Q8NCC3 412 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 DENND6BQ8NEG7 585 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 RAB7BQ96AH8 199 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 PDXPQ96GD0 296 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 CELF6Q96J87 481 aaKnown RBP10.26□□□□□ -0.77
LINC01004-202ENST00000450686 GDAP1L1Q96MZ0 367 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 CPEB1Q9BZB8 566 aaKnown RBP10.26□□□□□ -0.77
LINC01004-202ENST00000450686 SLC13A1Q9BZW2 595 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 TTYH3Q9C0H2 523 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 SUDS3Q9H7L9 328 aaPredicted RBP10.26□□□□□ -0.77
LINC01004-202ENST00000450686 USP29Q9HBJ7 922 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 SALL4Q9UJQ4 1053 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 ATXN7L1Q9ULK2 861 aaPredicted RBP10.26□□□□□ -0.77
LINC01004-202ENST00000450686 PADI4Q9UM07 663 aa10.26□□□□□ -0.77
LINC01004-202ENST00000450686 HPCAL4Q9UM19 191 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms