RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 SERPINF2P08697 491 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 GOLGA6DP0CG33 693 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 C5AR1P21730 350 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 XPAP23025 273 aaPredicted RBP9.28□□□□□ -0.92
RFX3-207ENST00000449190 ITPKAP23677 461 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 SERPINA4P29622 427 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 SLC8A1P32418 973 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 PSMD8P48556 350 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 AP1S1P61966 158 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 IRX4P78413 519 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 CKAP4Q07065 602 aaKnown RBP9.28□□□□□ -0.92
RFX3-207ENST00000449190 CST6Q15828 149 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 CCDC6Q16204 474 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 DUOXA1Q1HG43 343 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 TTC31Q49AM3 519 aaPredicted RBP9.28□□□□□ -0.92
RFX3-207ENST00000449190 WDR45BQ5MNZ6 344 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 DNTTIP2Q5QJE6 756 aaKnown RBP9.28□□□□□ -0.92
RFX3-207ENST00000449190 PEAR1Q5VY43 1037 aaPredicted RBP9.28□□□□□ -0.92
RFX3-207ENST00000449190 DRICH1Q6PGQ1 229 aaPredicted RBP9.28□□□□□ -0.92
RFX3-207ENST00000449190 SLC23A3Q6PIS1 610 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 C4orf22Q6V702 233 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 GDPD4Q6W3E5 623 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 ARHGEF18Q6ZSZ5 1173 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 USP30Q70CQ3 517 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 ERMP1Q7Z2K6 904 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 SLC41A1Q8IVJ1 513 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.28□□□□□ -0.92
RFX3-207ENST00000449190 DEFB119Q8N690 84 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 CCDC89Q8N998 374 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 FAM71DQ8N9W8 422 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 CHST14Q8NCH0 376 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 ATL2Q8NHH9 583 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 SLC35B2Q8TB61 432 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 PIP4K2CQ8TBX8 421 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 GRIN3AQ8TCU5 1115 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 GRK7Q8WTQ7 553 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 ATG4AQ8WYN0 398 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 DNASE2BQ8WZ79 361 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 EXOC2Q96KP1 924 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 TEKT5Q96M29 485 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 RUNDC3BQ96NL0 473 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 TUBGCP5Q96RT8 1024 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 OMDQ99983 421 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 SEMA3CQ99985 751 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 NUSAP1Q9BXS6 441 aaKnown RBP9.28□□□□□ -0.92
RFX3-207ENST00000449190 CPEB1Q9BZB8 566 aaKnown RBP9.28□□□□□ -0.92
RFX3-207ENST00000449190 SMOC1Q9H4F8 434 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 C10orf88Q9H8K7 445 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 SGK2Q9HBY8 427 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 GLOD4Q9HC38 313 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 TMEM74BQ9NUR3 256 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 GOLGA6AQ9NYA3 693 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 CDV3Q9UKY7 258 aaKnown RBP9.28□□□□□ -0.92
RFX3-207ENST00000449190 SLC6A14Q9UN76 642 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 ATP8A1Q9Y2Q0 1164 aa9.28□□□□□ -0.92
RFX3-207ENST00000449190 EML5Q05BV3 1969 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 C5orf60A6NFR6 353 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 ESPNB1AK53 854 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 OPHN1O60890 802 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 ZNF821O75541 412 aaPredicted RBP9.27□□□□□ -0.93
RFX3-207ENST00000449190 LEFTY1O75610 366 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 IFNB1P01574 187 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 HLA-DQB2P05538 268 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 NFKBIAP25963 317 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 PTPN3P26045 913 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 MAXP61244 160 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 POLR2LP62875 67 aaKnown RBP9.27□□□□□ -0.93
RFX3-207ENST00000449190 FOXK2Q01167 660 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 WASHC5Q12768 1159 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 ZBTB17Q13105 803 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 SIX1Q15475 284 aaPredicted RBP9.27□□□□□ -0.93
RFX3-207ENST00000449190 TRIM61Q5EBN2 209 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 ANKRD20A2Q5SQ80 823 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 STPG1Q5TH74 334 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 ANKRD20A1Q5TYW2 823 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 ANKRD20A3Q5VUR7 823 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 CCDC70Q6NSX1 233 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 NCEH1Q6PIU2 408 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 ARMCX6Q7L4S7 300 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 DGLUCYQ7Z3D6 616 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 CREG2Q8IUH2 290 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 NDUFAF2Q8N183 169 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 HDDC3Q8N4P3 179 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 PRELID2Q8N945 189 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 OR6K2Q8NGY2 324 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 HCAR2Q8TDS4 363 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 ZNF641Q96N77 438 aaPredicted RBP9.27□□□□□ -0.93
RFX3-207ENST00000449190 MGME1Q9BQP7 344 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 TMEM121Q9BTD3 319 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 GPR174Q9BXC1 333 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 CEP41Q9BYV8 373 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 BTBD1Q9H0C5 482 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 SLC25A51Q9H1U9 297 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 PABPC3Q9H361 631 aaKnown RBP9.27□□□□□ -0.93
RFX3-207ENST00000449190 SUV39H2Q9H5I1 410 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 USP29Q9HBJ7 922 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 NOD2Q9HC29 1040 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 CD93Q9NPY3 652 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 FBXL12Q9NXK8 326 aa9.27□□□□□ -0.93
RFX3-207ENST00000449190 SMARCAL1Q9NZC9 954 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms