RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 CNTNAP3Q9BZ76 1288 aa14.21□□□□□ -0.13
RTFDC1-204ENST00000449062 SEPT3Q9UH03 358 aa14.21□□□□□ -0.13
RTFDC1-204ENST00000449062 PCDHB9Q9Y5E1 797 aa14.21□□□□□ -0.13
RTFDC1-204ENST00000449062 ANKRD11Q6UB99 2663 aaPredicted RBP14.21□□□□□ -0.13
RTFDC1-204ENST00000449062 TMEM131Q92545 1883 aa14.21□□□□□ -0.14
RTFDC1-204ENST00000449062 TTC24A2A3L6 582 aaPredicted RBP14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 RIOK3O14730 519 aaKnown RBP14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 HTRA2O43464 458 aaPredicted RBP14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 TRIM16O95361 564 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 KRT7P08729 469 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 FTH1P19P0C7X4 201 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 SPINK2P20155 84 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 ARRB1P49407 418 aaPredicted RBP14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 RENBPP51606 427 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 PFN3P60673 137 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 GALNT2Q10471 571 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 SLC10A2Q12908 348 aaPredicted RBP14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 FOXC1Q12948 553 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 SGCGQ13326 291 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 KRT81Q14533 505 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 IHHQ14623 411 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 MESDQ14696 234 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 NCBP2-AS2Q69YL0 99 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 BRAT1Q6PJG6 821 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 KDM7AQ6ZMT4 941 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 DCP2Q8IU60 420 aaKnown RBP14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 RHOT2Q8IXI1 618 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 CBARPQ8N350 705 aaPredicted RBP14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 CHCHD4Q8N4Q1 142 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 KCTD6Q8NC69 237 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 ADAMTS14Q8WXS8 1223 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 RFFLQ8WZ73 363 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 FATE1Q969F0 183 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 IFT43Q96FT9 208 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 TSGA13Q96PP4 275 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 ZNF670Q9BS34 389 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 SCNM1Q9BWG6 230 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 SP110Q9HB58 689 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 PCDH12Q9NPG4 1184 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 ASPMQ8IZT6 3477 aa14.2□□□□□ -0.14
RTFDC1-204ENST00000449062 SPTY2D1-AS1A0A0U1RR47 76 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 NEMP1O14524 444 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 YKT6O15498 198 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 TNFSF14O43557 240 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 HYAL3O43820 417 aaPredicted RBP14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 GIMD1P0DJR0 217 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 SSR1P43307 286 aaKnown RBP14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 SCNN1BP51168 640 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 HADHBP55084 474 aaKnown RBP14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 AP1S1P61966 158 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 FZD2Q14332 565 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 AGERQ15109 404 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 LRRC38Q5VT99 294 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 KYAT3Q6YP21 454 aaKnown RBP14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 OXR1Q8N573 874 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 PNPLA1Q8N8W4 532 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 DENND6BQ8NEG7 585 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 MAML1Q92585 1016 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 RNF157Q96PX1 679 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 NUDCD1Q96RS6 583 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 MGME1Q9BQP7 344 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 CINPQ9BW66 212 aaPredicted RBP14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 ATP13A3Q9H7F0 1226 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 NOD2Q9HC29 1040 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 MBNL1Q9NR56 388 aaKnown RBP14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 APC2O95996 2303 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 CHD6Q8TD26 2715 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 ZZEF1O43149 2961 aa14.19□□□□□ -0.14
RTFDC1-204ENST00000449062 CFAP69A5D8W1 941 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 A6NNZ2 444 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 ZNF487B1APH4 448 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 MFSD11O43934 449 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 ITGAVP06756 1048 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 DGKAP23743 735 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 SERPINB6P35237 376 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 HSPA9P38646 679 aaKnown RBP14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 MMP12P39900 470 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 GARSP41250 739 aaKnown RBP14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 MAGEA1P43355 309 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 GBE1Q04446 702 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 BCL2L1Q07817 233 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 VSIG1Q86XK7 387 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 MAP7D3Q8IWC1 876 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 CCDC170Q8IYT3 715 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 TP53I13Q8NBR0 393 aaPredicted RBP14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 PANX2Q96RD6 677 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 WRAP53Q9BUR4 548 aaKnown RBP14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 CALN1Q9BXU9 219 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 UCKL1Q9NWZ5 548 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 KLF15Q9UIH9 416 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 PNMA8BQ9ULN7 279 aaPredicted RBP14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 PCDHGC4Q9Y5F7 938 aa14.18□□□□□ -0.14
RTFDC1-204ENST00000449062 PKD1L2Q7Z442 2459 aa14.17□□□□□ -0.14
RTFDC1-204ENST00000449062 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.17□□□□□ -0.14
RTFDC1-204ENST00000449062 TMEM110-MUSTN1A8MSY1 372 aa14.17□□□□□ -0.14
RTFDC1-204ENST00000449062 TRIM38O00635 465 aa14.17□□□□□ -0.14
RTFDC1-204ENST00000449062 FPGTO14772 594 aa14.17□□□□□ -0.14
RTFDC1-204ENST00000449062 MATN3O15232 486 aa14.17□□□□□ -0.14
RTFDC1-204ENST00000449062 TM7SF2O76062 418 aa14.17□□□□□ -0.14
RTFDC1-204ENST00000449062 PRKCGP05129 697 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms