RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 UPK3BL2E5RIL1 263 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 RNF103O00237 685 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 CEP104O60308 925 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 PTPN3P26045 913 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 RBL1P28749 1068 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 NUDT1P36639 197 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 PLA2G5P39877 138 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 CCR5P51681 352 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 GNG11P61952 73 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 DSC2Q02487 901 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 UGP2Q16851 508 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 ARMC12Q5T9G4 340 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 B4GALNT4Q76KP1 1039 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 PID1Q7Z2X4 250 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 PRPF39Q86UA1 669 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 TRIM69Q86WT6 500 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 PIGKQ92643 395 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 BIRC7Q96CA5 298 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 ECHDC3Q96DC8 303 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 FEM1CQ96JP0 617 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 TEKT5Q96M29 485 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 CEP41Q9BYV8 373 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 ARRDC1-AS1Q9H2J1 176 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 PCDHGC4Q9Y5F7 938 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 FADS3Q9Y5Q0 445 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 CACNA1HO95180 2353 aa13.2□□□□□ -0.3
ERGIC3-209ENST00000447986 TTC24A2A3L6 582 aaPredicted RBP13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 CFAP69A5D8W1 941 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 TRAFD1O14545 582 aaPredicted RBP13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 KCNN4O15554 427 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 FOXD2O60548 495 aaPredicted RBP13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 GFRA3O60609 400 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 RNGTTO60942 597 aaKnown RBP13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 LRP3O75074 770 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 GJB3O75712 270 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 CPP00450 1065 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 FGGP02679 453 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 ITPKAP23677 461 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 CXCR5P32302 372 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 MPLP40238 635 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 TNNT3P45378 269 aaPredicted RBP13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 TAS2R38P59533 333 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 RPS21P63220 83 aaKnown RBP13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 SETMARQ53H47 684 aaPredicted RBP13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 ITPRIPL1Q6GPH6 555 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 KIAA1161Q6NSJ0 714 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 ASCL5Q7RTU5 278 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 GPR161Q8N6U8 529 aaKnown RBP13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 CNTD1Q8N815 330 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 CEP76Q8TAP6 659 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 DNASE2BQ8WZ79 361 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 VOPP1Q96AW1 172 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 NAP1L3Q99457 506 aaPredicted RBP13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 FAM118BQ9BPY3 351 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 MIR1-1HGQ9H1L0 117 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 SLC25A51Q9H1U9 297 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 VPS45Q9NRW7 570 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 KCND1Q9NSA2 647 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 EIF2B4Q9UI10 523 aaKnown RBP13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 ZKSCAN5Q9Y2L8 839 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 PCDHB9Q9Y5E1 797 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 RAI2Q9Y5P3 530 aa13.19□□□□□ -0.3
ERGIC3-209ENST00000447986 WDFY4Q6ZS81 3184 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 PRR5-ARHGAP8B1AHC4 643 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 HTRA2O43464 458 aaPredicted RBP13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 TIMP2P16035 220 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 CD27P26842 260 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 CD86P42081 329 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 ABL2P42684 1182 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 EPHB1P54762 984 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 WASHC5Q12768 1159 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 LONRF2Q1L5Z9 754 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 ADAT2Q7Z6V5 191 aaKnown RBP13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 HORMAD1Q86X24 394 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 ARRDC2Q8TBH0 407 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 CXorf40AQ8TE69 158 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 PPP1R2P1Q96PQ5 205 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 GLOD4Q9HC38 313 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 HOMER3Q9NSC5 361 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 PILRBQ9UKJ0 227 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 PHTF1Q9UMS5 762 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 DMTF1Q9Y222 760 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 SHROOM3Q8TF72 1996 aa13.18□□□□□ -0.3
ERGIC3-209ENST00000447986 ATXN2Q99700 1313 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 A0A1W2PPC4 97 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 A0A1W2PQU0 124 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 TCRBV7S2A1N4TA0A589 114 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 AREL1O15033 823 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 LATO43561 262 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 PGLSO95336 258 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 ATP1A1P05023 1023 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 IGHV4-34P06331 123 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 TCP1P17987 556 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 MAOBP27338 520 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 STIP1P31948 543 aaKnown RBP13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 FAM193AP78312 1265 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 TRAF2Q12933 501 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 SLC14A2Q15849 920 aa13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 PEAR1Q5VY43 1037 aaPredicted RBP13.17□□□□□ -0.3
ERGIC3-209ENST00000447986 USP45Q70EL2 814 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms