RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 YKT6O15498 198 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 INSIG1O15503 277 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 ZNF883P0CG24 379 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 PRLRP16471 622 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 CA4P22748 312 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 CES1P23141 567 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 CTNNA2P26232 953 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 CCT8P50990 548 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 RWDD2BP57060 319 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 COPS2P61201 443 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 PDK1Q15118 436 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 KIF19Q2TAC6 998 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 INAVAQ3KP66 663 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 PPM1JQ5JR12 505 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 NT5DC3Q86UY8 548 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 CAMK1DQ8IU85 385 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 NDUFAF2Q8N183 169 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 KLK6Q92876 244 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 KLHDC7BQ96G42 594 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 NUDCD1Q96RS6 583 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 ORAI3Q9BRQ5 295 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 BRD8Q9H0E9 1235 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 EBF2Q9HAK2 575 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 NT5MQ9NPB1 228 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 TM7SF3Q9NS93 570 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 PCDHB9Q9Y5E1 797 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 SNX11Q9Y5W9 270 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 ADAMTS9Q9P2N4 1935 aa16.53■□□□□ 0.24
SF3A1-204ENST00000447376 PCDH15Q96QU1 1955 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 C3orf70A6NLC5 250 aaPredicted RBP16.52■□□□□ 0.24
SF3A1-204ENST00000447376 TLR4O00206 839 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 RNF103O00237 685 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 FPGTO14772 594 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 SOCS5O75159 536 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 CSRP1P21291 193 aaKnown RBP16.52■□□□□ 0.24
SF3A1-204ENST00000447376 ABL2P42684 1182 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 CTSKP43235 329 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 NOVA1P51513 510 aaKnown RBP16.52■□□□□ 0.24
SF3A1-204ENST00000447376 DYNLT1P63172 113 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 GBE1Q04446 702 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 UGP2Q16851 508 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 ZNF284Q2VY69 593 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 TMEM259Q4ZIN3 620 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 TFDP3Q5H9I0 405 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 SEL1L3Q68CR1 1132 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 LAYNQ6UX15 382 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 CCDC13Q8IYE1 715 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 PQLC3Q8N755 202 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 OR2I1PQ8NGU4 316 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 PDCD6IPQ8WUM4 868 aaKnown RBP16.52■□□□□ 0.24
SF3A1-204ENST00000447376 FATE1Q969F0 183 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 HDAC11Q96DB2 347 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 TSGA13Q96PP4 275 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 MYOCQ99972 504 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 MGME1Q9BQP7 344 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 DTLQ9NZJ0 730 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 ZFR2Q9UPR6 939 aaKnown RBP16.52■□□□□ 0.24
SF3A1-204ENST00000447376 SLCO1B1Q9Y6L6 691 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 CEP250Q9BV73 2442 aa16.52■□□□□ 0.24
SF3A1-204ENST00000447376 DMXL1Q9Y485 3027 aa16.52■□□□□ 0.23
SF3A1-204ENST00000447376 SPTBN4Q9H254 2564 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 PLXNA2O75051 1894 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 TSPAN11A1L157 253 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 A6NNZ2 444 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 C10orf142B7Z368 130 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 AREL1O15033 823 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 TM7SF2O76062 418 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 MAP3K6O95382 1288 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 PAK4O96013 591 aaPredicted RBP16.51■□□□□ 0.23
SF3A1-204ENST00000447376 CEACAM1P13688 526 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 CCNB1P14635 433 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 TIMP2P16035 220 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 CDKN2BP42772 138 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 RGRP47804 291 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 NR2C2P49116 596 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 FAM193AP78312 1265 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 AP1B1Q10567 949 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 LRRC73Q5JTD7 316 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 CCDC181Q5TID7 509 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 KAZNQ674X7 775 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 SLC9A4Q6AI14 798 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 MFSD7Q6UXD7 560 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 SPOCD1Q6ZMY3 1216 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 DCP2Q8IU60 420 aaKnown RBP16.51■□□□□ 0.23
SF3A1-204ENST00000447376 DENND6BQ8NEG7 585 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 TRIM58Q8NG06 486 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 SETD7Q8WTS6 366 aaKnown RBP16.51■□□□□ 0.23
SF3A1-204ENST00000447376 ASB12Q8WXK4 309 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 KRT35Q92764 455 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 RBM22Q9NW64 420 aaKnown RBP eCLIP16.51■□□□□ 0.23
SF3A1-204ENST00000447376 ITM2BQ9Y287 266 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 ATP8A1Q9Y2Q0 1164 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 PCDHGB2Q9Y5G2 931 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 HS3ST3A1Q9Y663 406 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 CAPN6Q9Y6Q1 641 aa16.51■□□□□ 0.23
SF3A1-204ENST00000447376 A0A1W2PR77 199 aa16.5■□□□□ 0.23
SF3A1-204ENST00000447376 IGLON5A6NGN9 336 aa16.5■□□□□ 0.23
SF3A1-204ENST00000447376 MUSKO15146 869 aa16.5■□□□□ 0.23
SF3A1-204ENST00000447376 FLRT2O43155 660 aa16.5■□□□□ 0.23
SF3A1-204ENST00000447376 KCNK5O95279 499 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms