RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 CLN3Q13286 438 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 TXNRD3NBQ6F5E7 133 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 RETSATQ6NUM9 610 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 RFX8Q6ZV50 586 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 USP53Q70EK8 1073 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 RHOT2Q8IXI1 618 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 ATP11CQ8NB49 1132 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 EXTL1Q92935 676 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 OMDQ99983 421 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 SEMA3CQ99985 751 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 ZWILCHQ9H900 591 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 ATP13A1Q9HD20 1204 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 WDR70Q9NW82 654 aa12.64□□□□□ -0.39
SSR4-205ENST00000447375 EPN1Q9Y6I3 576 aaPredicted RBP12.64□□□□□ -0.39
SSR4-205ENST00000447375 DOCK4Q8N1I0 1966 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 A0A1W2PNU3 283 aaPredicted RBP12.63□□□□□ -0.39
SSR4-205ENST00000447375 C10orf142B7Z368 130 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 EEF2KO00418 725 aaKnown RBP12.63□□□□□ -0.39
SSR4-205ENST00000447375 SMAD6O43541 496 aaKnown RBP12.63□□□□□ -0.39
SSR4-205ENST00000447375 KDELR3O43731 214 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 RNASEH1O60930 286 aaKnown RBP12.63□□□□□ -0.39
SSR4-205ENST00000447375 CD160O95971 181 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 ITGB2P05107 769 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 CKMT1AP12532 417 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 GOT1P17174 413 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 CYLC1P35663 651 aaPredicted RBP12.63□□□□□ -0.39
SSR4-205ENST00000447375 NDST2P52849 883 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 ARF5P84085 180 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 DPYSQ14117 519 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 ELAVL3Q14576 367 aaKnown RBP12.63□□□□□ -0.39
SSR4-205ENST00000447375 SPA17Q15506 151 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 HADHQ16836 314 aaKnown RBP12.63□□□□□ -0.39
SSR4-205ENST00000447375 ISXQ2M1V0 245 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 SMTNL2Q2TAL5 461 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 PARP15Q460N3 678 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 ACCSLQ4AC99 568 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 PPP6R3Q5H9R7 873 aaPredicted RBP12.63□□□□□ -0.39
SSR4-205ENST00000447375 AFMIDQ63HM1 303 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 NAPEPLDQ6IQ20 393 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 LINGO4Q6UY18 593 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 POLNQ7Z5Q5 900 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 STK40Q8N2I9 435 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 OR4C6Q8NH72 309 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 FAM71BQ8TC56 605 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 HSPH1Q92598 858 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 KLC2Q9H0B6 622 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.63□□□□□ -0.39
SSR4-205ENST00000447375 FZD4Q9ULV1 537 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 HPCAL4Q9UM19 191 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 MAN2B2Q9Y2E5 1009 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 PCDHA13Q9Y5I0 950 aa12.63□□□□□ -0.39
SSR4-205ENST00000447375 AHCTF1Q8WYP5 2266 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 ZSCAN5CA6NGD5 496 aaPredicted RBP12.62□□□□□ -0.39
SSR4-205ENST00000447375 SOWAHDA6NJG2 315 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 CDRT15L2A8MXV6 281 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 RASA4BC9J798 803 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 H3BRJ5 948 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 MCF2LO15068 1137 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 MID1O15344 667 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 DAPK3O43293 454 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 RASA4O43374 803 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 ZNF821O75541 412 aaPredicted RBP12.62□□□□□ -0.39
SSR4-205ENST00000447375 NDUFA10O95299 355 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 GP1BAP07359 652 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 FAM87AP0C7U9 286 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 ERCC2P18074 760 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 IL4RP24394 825 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 SSR1P43307 286 aaKnown RBP12.62□□□□□ -0.39
SSR4-205ENST00000447375 SERPINH1P50454 418 aaKnown RBP12.62□□□□□ -0.39
SSR4-205ENST00000447375 ARSEP51690 589 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 HADHBP55084 474 aaKnown RBP12.62□□□□□ -0.39
SSR4-205ENST00000447375 GEMIN4P57678 1058 aaKnown RBP12.62□□□□□ -0.39
SSR4-205ENST00000447375 MESDQ14696 234 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 CST6Q15828 149 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 FOXR1Q6PIV2 292 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 Q6ZVU0 165 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 PRPF39Q86UA1 669 aaKnown RBP12.62□□□□□ -0.39
SSR4-205ENST00000447375 CPNE8Q86YQ8 564 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 MMAAQ8IVH4 418 aaKnown RBP12.62□□□□□ -0.39
SSR4-205ENST00000447375 ARL14Q8N4G2 192 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 OR2A12Q8NGT7 310 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 OR14C36Q8NHC7 312 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 MAPK15Q8TD08 544 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 ISG20Q96AZ6 181 aaKnown RBP12.62□□□□□ -0.39
SSR4-205ENST00000447375 SGF29Q96ES7 293 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 HMCESQ96FZ2 354 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 ATXN7L3BQ96GX2 97 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 PRR11Q96HE9 360 aaPredicted RBP12.62□□□□□ -0.39
SSR4-205ENST00000447375 CSPG4P5Q96PW8 444 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 PSMG3-AS1Q96PY0 264 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 CEP44Q9C0F1 390 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 LRRC19Q9H756 370 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 PCDH18Q9HCL0 1135 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 RCOR3Q9P2K3 495 aaPredicted RBP12.62□□□□□ -0.39
SSR4-205ENST00000447375 PPM1HQ9ULR3 514 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 TPX2Q9ULW0 747 aaKnown RBP12.62□□□□□ -0.39
SSR4-205ENST00000447375 PCDHGA8Q9Y5G5 932 aa12.62□□□□□ -0.39
SSR4-205ENST00000447375 TBC1D3DA0A087WVF3 549 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 TBC1D3IA0A087WXS9 549 aa12.61□□□□□ -0.39
SSR4-205ENST00000447375 TBC1D3EA0A087X179 549 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms