RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 TRIM10Q9UDY6 481 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 SRRDQ9UH36 339 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 TAF4O00268 1085 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 ULK1O75385 1050 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 TFE3P19532 575 aaPredicted RBP8.6□□□□□ -1.03
PTPN3-204ENST00000446349 PIK3R1P27986 724 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 IRF5Q13568 498 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 NR1D2Q14995 579 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 TARBP2Q15633 366 aaKnown RBP8.6□□□□□ -1.03
PTPN3-204ENST00000446349 ALFQ53S48 1182 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 SH3D19Q5HYK7 790 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 BBS12Q6ZW61 710 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 DNAAF5Q86Y56 855 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 NATD1Q8N6N6 113 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 TTLQ8NG68 377 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 ABTB1Q969K4 478 aaPredicted RBP8.6□□□□□ -1.03
PTPN3-204ENST00000446349 FAM118BQ9BPY3 351 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 REEP1Q9H902 201 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 CFAP97Q9P2B7 532 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 GTF2A1LQ9UNN4 478 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 INVSQ9Y283 1065 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 PIK3C2AO00443 1686 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 VSTM5A8MXK1 200 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 ISM1B1AKI9 464 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 NEDD8-MDP1E9PL57 170 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 LDLRP01130 860 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 AQP5P55064 265 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 LAYNQ6UX15 382 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 TCF25Q9BQ70 676 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 OSGEPQ9NPF4 335 aa8.6□□□□□ -1.03
PTPN3-204ENST00000446349 BIRC5O15392 142 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 ETS1P14921 441 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 WARSP23381 471 aaKnown RBP8.59□□□□□ -1.03
PTPN3-204ENST00000446349 SERPINB1P30740 379 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 DENND6AQ8IWF6 608 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 SUN3Q8TAQ9 357 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 KCNK4Q9NYG8 393 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 CDC14AQ9UNH5 594 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 RGPD8O14715 1765 aaPredicted RBP8.59□□□□□ -1.03
PTPN3-204ENST00000446349 UBXN7O94888 489 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 PDHA1P08559 390 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 UMPSP11172 480 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 SQLEQ14534 574 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 MPP5Q8N3R9 675 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 SH2D3CQ8N5H7 860 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 RASSF5Q8WWW0 418 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 PHF21BQ96EK2 531 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 PCDHGC3Q9UN70 934 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 GSTK1Q9Y2Q3 226 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 ATRNL1Q5VV63 1379 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 ANKRD63C9JTQ0 380 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 RIPK2O43353 540 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 SPAM1P38567 509 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 RAB10P61026 200 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 DEPDC4Q8N2C3 294 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 HAS1Q92839 578 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 RNFT2Q96EX2 444 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 CAAP1Q9H8G2 361 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 GALNT8Q9NY28 637 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 LEF1Q9UJU2 399 aaPredicted RBP8.59□□□□□ -1.03
PTPN3-204ENST00000446349 ANAPC2Q9UJX6 822 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 ATXN2Q99700 1313 aaKnown RBP8.59□□□□□ -1.03
PTPN3-204ENST00000446349 USP27XA6NNY8 438 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 KCNK1O00180 336 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 BAIAP3O94812 1187 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 TNFRSF8P28908 595 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 UGT1A5P35504 534 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 SOX10P56693 466 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 KIAA0408Q6ZU52 694 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 FAM228AQ86W67 206 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 SNRNP25Q9BV90 132 aaKnown RBP8.59□□□□□ -1.03
PTPN3-204ENST00000446349 PRRG4Q9BZD6 226 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 LMAN2LQ9H0V9 348 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 ASF1AQ9Y294 204 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 TRAFD1O14545 582 aaPredicted RBP8.59□□□□□ -1.03
PTPN3-204ENST00000446349 BMP7P18075 431 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 HSPA14Q0VDF9 509 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 NYAP1Q6ZVC0 841 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 GPR141Q7Z602 305 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 SH3RF1Q7Z6J0 888 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 RAVER1Q8IY67 606 aaKnown RBP8.59□□□□□ -1.03
PTPN3-204ENST00000446349 COPS5Q92905 334 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 PCDHB11Q9Y5F2 797 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 GSAPA4D1B5 854 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 CXCR3P49682 368 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 ZNF621Q6ZSS3 439 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 TMC3Q7Z5M5 1100 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 COMMD2Q86X83 199 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 ADAM32Q8TC27 787 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 HCAR2Q8TDS4 363 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 TCF12Q99081 682 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 DHX33Q9H6R0 707 aaKnown RBP8.59□□□□□ -1.03
PTPN3-204ENST00000446349 DUSP12Q9UNI6 340 aa8.59□□□□□ -1.03
PTPN3-204ENST00000446349 NDST3O95803 873 aa8.59□□□□□ -1.04
PTPN3-204ENST00000446349 ATP6V1B2P21281 511 aa8.59□□□□□ -1.04
PTPN3-204ENST00000446349 CORO1AP31146 461 aaKnown RBP8.59□□□□□ -1.04
PTPN3-204ENST00000446349 CDH5P33151 784 aaPredicted RBP8.59□□□□□ -1.04
PTPN3-204ENST00000446349 TRAF2Q12933 501 aa8.59□□□□□ -1.04
PTPN3-204ENST00000446349 GPM6BQ13491 265 aa8.59□□□□□ -1.04
PTPN3-204ENST00000446349 CERCAMQ5T4B2 595 aa8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms