RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 KCNS3Q9BQ31 491 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 AIREO43918 545 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 IFNA7P01567 189 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 STAT5BP51692 787 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 DLG2Q15700 870 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 FOXB2Q5VYV0 432 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 BHLHB9Q6PI77 547 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 ACSS2Q9NR19 701 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.93□□□□□ -1.14
SMG1-202ENST00000446231 LINC00032P0C843 101 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 PSMB4P28070 264 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 NR4A2P43354 598 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 SKIV2LQ15477 1246 aaKnown RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 CDC73Q6P1J9 531 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 DNAJC14Q6Y2X3 702 aaPredicted RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 GCNT7Q6ZNI0 430 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 FAM126BQ8IXS8 530 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 UXS1Q8NBZ7 420 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 TMIGD2Q96BF3 282 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 EGFL7Q9UHF1 273 aa7.93□□□□□ -1.14
SMG1-202ENST00000446231 NOCTQ9UK39 431 aaKnown RBP7.93□□□□□ -1.14
SMG1-202ENST00000446231 VPS26AO75436 327 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 NPTX1Q15818 432 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 ASTN2O75129 1339 aaPredicted RBP7.92□□□□□ -1.14
SMG1-202ENST00000446231 OR7A10O76100 309 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 RASAL1O95294 804 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 IGFBP5P24593 272 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 PLET1Q6UQ28 207 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 GALNT5Q7Z7M9 940 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 ANKRD13BQ86YJ7 626 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 OR56A4Q8NGH8 313 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 ZNF347Q96SE7 839 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 KRBA1A5PL33 1030 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 GSTM1P09488 218 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 MYL12AP19105 171 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 MMP8P22894 467 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 VGLL2Q8N8G2 317 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 PPM1MQ96MI6 270 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 SENP6Q9GZR1 1112 aaPredicted RBP7.92□□□□□ -1.14
SMG1-202ENST00000446231 H0Y858 1186 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 SMG8Q8ND04 991 aaKnown RBP7.92□□□□□ -1.14
SMG1-202ENST00000446231 ZFYVE16Q7Z3T8 1539 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 AZIN1O14977 448 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 C8BP07358 591 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 FMO3P31513 532 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 RORCP51449 518 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 HGH1Q9BTY7 390 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 PRDM16Q9HAZ2 1276 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 TDRD10Q5VZ19 366 aaKnown RBP7.92□□□□□ -1.14
SMG1-202ENST00000446231 MRNIPQ6NTE8 343 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 TIFABQ6ZNK6 161 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 ZNF668Q96K58 619 aaPredicted RBP7.92□□□□□ -1.14
SMG1-202ENST00000446231 SLC22A4Q9H015 551 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 MORF4L1Q9UBU8 362 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 ISPDA4D126 451 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 ZW10O43264 779 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 CDC42P60953 191 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 KIAA0408Q6ZU52 694 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 TMEM132CQ8N3T6 1108 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 ADAM32Q8TC27 787 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 TEKT5Q96M29 485 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 OCEL1Q9H607 264 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 LATS2Q9NRM7 1088 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 AJAP1Q9UKB5 411 aaPredicted RBP7.92□□□□□ -1.14
SMG1-202ENST00000446231 ROBO3Q96MS0 1386 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 H3BMM5 538 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 TGFB1I1O43294 461 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 RBM48Q5RL73 367 aaKnown RBP7.92□□□□□ -1.14
SMG1-202ENST00000446231 REP15Q6BDI9 236 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 CMC1Q7Z7K0 106 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 APOL5Q9BWW9 433 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 AZGP1P25311 298 aaKnown RBP7.92□□□□□ -1.14
SMG1-202ENST00000446231 SPESP1Q6UW49 350 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 SZRD1Q7Z422 152 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 GALNT12Q8IXK2 581 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 CLYBLQ8N0X4 340 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 MIR1-1HGQ9H1L0 117 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 CATSPERBQ9H7T0 1116 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 SNX15Q9NRS6 342 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 WWOXQ9NZC7 414 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 FAM240BA0A1B0GVZ2 78 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 GRM2Q14416 872 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 MZT2AQ6P582 158 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 CAMKK1Q8N5S9 505 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 NKX2-3Q8TAU0 364 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 TBATAQ96M53 351 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 SNX9Q9Y5X1 595 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 ABCA8O94911 1581 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 A0A0G2JPF8 293 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 HNRNPCL3B7ZW38 293 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 ARPC2O15144 300 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 HNRNPCL4P0DMR1 293 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 PUDPQ08623 228 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 TCEAL1Q15170 157 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 TNFAIP8L3Q5GJ75 292 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 RASSF6Q6ZTQ3 369 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 SH3BP5LQ7L8J4 393 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 TRUB1Q8WWH5 349 aaKnown RBP7.92□□□□□ -1.14
SMG1-202ENST00000446231 ASB9Q96DX5 294 aa7.92□□□□□ -1.14
SMG1-202ENST00000446231 H2AFY2Q9P0M6 372 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms