RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 NCSTNQ92542 709 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 ZNF778Q96MU6 729 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 LBHD1Q9BQE6 289 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 CADM1Q9BY67 442 aaKnown RBP4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 EHD2Q9NZN4 543 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 MPP6Q9NZW5 540 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 SLCO3A1Q9UIG8 710 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 ACAD8Q9UKU7 415 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 PCDHGB5Q9Y5G0 923 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 FAM169AQ9Y6X4 670 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 MST1RQ04912 1400 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 A0A0A0MQY5 61 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 A0A1W2PPC1 479 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 DPPA5A6NC42 116 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 A6NNC1 897 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 MYO1GB0I1T2 1018 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 TEX22C9J3V5 150 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 INO80B-WBP1J3KQ70 363 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 ADAM20O43506 726 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 MTA2O94776 668 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 SCG2P13521 617 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 RARGP13631 454 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 COX7A2P14406 83 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 TNFRSF1BP20333 461 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 CHRNA5P30532 468 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 HOXC13P31276 330 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 MMP13P45452 471 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 CTCFP49711 727 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 PSMC6P62333 389 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 NEXNQ0ZGT2 675 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 PMPCAQ10713 525 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 IL13RA2Q14627 380 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 CRYMQ14894 314 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 RPE65Q16518 533 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 KYNUQ16719 465 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 SLC9B1Q4ZJI4 515 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 UBAP2Q5T6F2 1119 aaKnown RBP4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 IL27RAQ6UWB1 636 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 FAM83HQ6ZRV2 1179 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 IQCA1Q86XH1 822 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 ADGRF2Q8IZF7 708 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 KLHL29Q96CT2 875 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 TRMOQ9BU70 441 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 MRPL9Q9BYD2 267 aaKnown RBP4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 HIPK3Q9H422 1215 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 AAMDCQ9H7C9 122 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 ACTR5Q9H9F9 607 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 RNF146Q9NTX7 359 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 ICKQ9UPZ9 632 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 CLDN16Q9Y5I7 305 aa4.67□□□□□ -1.66
HMGB1P48-201ENST00000446155 A0A1W2PQM1 296 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 TRIM64A6NGJ6 449 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 TRIM64BA6NI03 449 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 A8MV72 311 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 BCAT2O15382 392 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 ENTPD3O75355 529 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 CSPG5O95196 566 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 EPN2O95208 641 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 BAG2O95816 211 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 AFPP02771 609 aaKnown RBP4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 EIF2S1P05198 315 aaKnown RBP4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 CDH2P19022 906 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 CIITAP33076 1130 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 PBX3P40426 434 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 CYP2J2P51589 502 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 PPP5CP53041 499 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 UBXN2AP68543 259 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 PPARDQ03181 441 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 TMEM115Q12893 351 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 AIMP1Q12904 312 aaKnown RBP4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 PPP2R5CQ13362 524 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 ENTPD8Q5MY95 495 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 C6orf10Q5SRN2 563 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 GARNL3Q5VVW2 1013 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 TTI2Q6NXR4 508 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 TMEM154Q6P9G4 183 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 AAGABQ6PD74 315 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 KLHL35Q6PF15 583 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 MFSD6Q6ZSS7 791 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 SLFN11Q7Z7L1 901 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 TRIM74Q86UV6 250 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 TRIM73Q86UV7 250 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 ARFGAP1Q8N6T3 406 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 NANOGP1Q8N7R0 232 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 KDM1BQ8NB78 822 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 POMGNT1Q8WZA1 660 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 ARHGEF2Q92974 986 aaKnown RBP4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 CDHR1Q96JP9 859 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 CMTM3Q96MX0 182 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 DESI2Q9BSY9 194 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 NPLQ9BXD5 320 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 NDST4Q9H3R1 872 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 KAT14Q9H8E8 782 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 ERVMER34-1Q9H9K5 563 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 PNRC2Q9NPJ4 139 aaKnown RBP4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 ZBTB40Q9NUA8 1239 aa4.66□□□□□ -1.66
HMGB1P48-201ENST00000446155 MRPL15Q9P015 296 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms