RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 CPP00450 1065 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 CR2P20023 1033 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 PTPN3P26045 913 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 RBL1P28749 1068 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 STIP1P31948 543 aaKnown RBP14.22□□□□□ -0.13
SSBP3-208ENST00000444533 METAP1P53582 386 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 DSC2Q02487 901 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 ZBTB17Q13105 803 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 KLF1Q13351 362 aaPredicted RBP14.22□□□□□ -0.13
SSBP3-208ENST00000444533 UGP2Q16851 508 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 ALG1LQ6GMV1 187 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 USP45Q70EL2 814 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 B4GALNT4Q76KP1 1039 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 SYT12Q8IV01 421 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 SUMF1Q8NBK3 374 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 TEKT5Q96M29 485 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 CEP41Q9BYV8 373 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 SLC25A51Q9H1U9 297 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 C6orf106Q9H6K1 298 aaPredicted RBP14.22□□□□□ -0.13
SSBP3-208ENST00000444533 GLOD4Q9HC38 313 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 KCND1Q9NSA2 647 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 RSPH14Q9UHP6 348 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 DNPEPQ9ULA0 475 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 PHTF1Q9UMS5 762 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 ZNF148Q9UQR1 794 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 PCDHB9Q9Y5E1 797 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 PCDHGC4Q9Y5F7 938 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 RAI2Q9Y5P3 530 aa14.22□□□□□ -0.13
SSBP3-208ENST00000444533 PLXND1Q9Y4D7 1925 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 FANCMQ8IYD8 2048 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 TSPAN11A1L157 253 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 TTC24A2A3L6 582 aaPredicted RBP14.21□□□□□ -0.13
SSBP3-208ENST00000444533 PGRMC1O00264 195 aaKnown RBP14.21□□□□□ -0.13
SSBP3-208ENST00000444533 CES2O00748 559 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 OPHN1O60890 802 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 RNGTTO60942 597 aaKnown RBP14.21□□□□□ -0.13
SSBP3-208ENST00000444533 LRP3O75074 770 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 ANXA9O76027 345 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 ATP1A1P05023 1023 aaKnown RBP14.21□□□□□ -0.13
SSBP3-208ENST00000444533 CYP2A6P11509 494 aaPredicted RBP14.21□□□□□ -0.13
SSBP3-208ENST00000444533 CD27P26842 260 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 MPLP40238 635 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 CD86P42081 329 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 PTGER3P43115 390 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 RPL26P61254 145 aaKnown RBP14.21□□□□□ -0.13
SSBP3-208ENST00000444533 FAM193AP78312 1265 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 TEAD4Q15561 434 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 ARHGEF18Q6ZSZ5 1173 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 GSTA5Q7RTV2 222 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 TRIM69Q86WT6 500 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 HORMAD1Q86X24 394 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 CCDC89Q8N998 374 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 FAM131CQ96AQ9 280 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 BIRC7Q96CA5 298 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 OSBPL9Q96SU4 736 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 FAM118BQ9BPY3 351 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 FSD1LQ9BXM9 530 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 NUSAP1Q9BXS6 441 aaKnown RBP14.21□□□□□ -0.13
SSBP3-208ENST00000444533 ARRDC1-AS1Q9H2J1 176 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 VPS45Q9NRW7 570 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 SNX12Q9UMY4 172 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 RPL26L1Q9UNX3 145 aaKnown RBP14.21□□□□□ -0.13
SSBP3-208ENST00000444533 DMTF1Q9Y222 760 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.21□□□□□ -0.13
SSBP3-208ENST00000444533 AAR2Q9Y312 384 aaKnown RBP14.21□□□□□ -0.13
SSBP3-208ENST00000444533 FADS3Q9Y5Q0 445 aa14.21□□□□□ -0.13
SSBP3-208ENST00000444533 THADAQ6YHU6 1953 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 A0A1W2PQU0 124 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 HTRA2O43464 458 aaPredicted RBP14.2□□□□□ -0.14
SSBP3-208ENST00000444533 LIASO43766 372 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 GFRA3O60609 400 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 PGLSO95336 258 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 TIMP2P16035 220 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 ITPKAP23677 461 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 MAT2AP31153 395 aaKnown RBP14.2□□□□□ -0.14
SSBP3-208ENST00000444533 CASQ1P31415 396 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 AKT2P31751 481 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 LMNB2Q03252 620 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 ARHGEF7Q14155 803 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 SLC14A2Q15849 920 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 CCNG2Q16589 344 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 DUOXA1Q1HG43 343 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 SLC41A1Q8IVJ1 513 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 ZNF567Q8N184 647 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 C12orf50Q8NA57 414 aaPredicted RBP14.2□□□□□ -0.14
SSBP3-208ENST00000444533 RMDN1Q96DB5 314 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 ECHDC3Q96DC8 303 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 IMP4Q96G21 291 aaKnown RBP14.2□□□□□ -0.14
SSBP3-208ENST00000444533 RBM15Q96T37 977 aaKnown RBP eCLIP14.2□□□□□ -0.14
SSBP3-208ENST00000444533 HERPUD2Q9BSE4 406 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 PCDH9Q9HC56 1237 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 PCDH12Q9NPG4 1184 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 AASDHPPTQ9NRN7 309 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 FAM153AQ9UHL3 310 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 EIF2B4Q9UI10 523 aaKnown RBP14.2□□□□□ -0.14
SSBP3-208ENST00000444533 EML5Q05BV3 1969 aa14.2□□□□□ -0.14
SSBP3-208ENST00000444533 A0A1B0GTW7 788 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 A0A1W2PPC4 97 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 TCRBV7S2A1N4TA0A589 114 aa14.19□□□□□ -0.14
SSBP3-208ENST00000444533 TRAFD1O14545 582 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms