RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 SERPINA4P29622 427 aa22.34■■□□□ 1.17
HDLBP-220ENST00000442730 NSUN2Q08J23 767 aaKnown RBP eCLIP22.34■■□□□ 1.17
HDLBP-220ENST00000442730 BNIP3Q12983 259 aa22.34■■□□□ 1.17
HDLBP-220ENST00000442730 UGP2Q16851 508 aa22.34■■□□□ 1.17
HDLBP-220ENST00000442730 CXorf40AQ8TE69 158 aa22.34■■□□□ 1.17
HDLBP-220ENST00000442730 ZNF670Q9BS34 389 aa22.34■■□□□ 1.17
HDLBP-220ENST00000442730 WRAP53Q9BUR4 548 aaKnown RBP22.34■■□□□ 1.17
HDLBP-220ENST00000442730 PCDH12Q9NPG4 1184 aa22.34■■□□□ 1.17
HDLBP-220ENST00000442730 TMEM110-MUSTN1A8MSY1 372 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 MFSD11O43934 449 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 MMP20O60882 483 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 SDC3O75056 442 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 MTA2O94776 668 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 KRT7P08729 469 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 XPAP23025 273 aaPredicted RBP22.33■■□□□ 1.17
HDLBP-220ENST00000442730 MMP12P39900 470 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 AP1S1P61966 158 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 ELP6Q0PNE2 266 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 ZNF235Q14590 738 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 TMEM52BQ4KMG9 183 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 CFAP58Q5T655 872 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 KDM7AQ6ZMT4 941 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 EID2Q8N6I1 236 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 PCDH19Q8TAB3 1148 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 SLC35G2Q8TBE7 412 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 ECHDC3Q96DC8 303 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 NSMCE3Q96MG7 304 aa22.33■■□□□ 1.17
HDLBP-220ENST00000442730 TMEM121BQ9BXQ6 578 aaPredicted RBP22.33■■□□□ 1.17
HDLBP-220ENST00000442730 FPGTO14772 594 aa22.32■■□□□ 1.16
HDLBP-220ENST00000442730 HSPA9P38646 679 aaKnown RBP22.32■■□□□ 1.16
HDLBP-220ENST00000442730 RABIFP47224 123 aa22.32■■□□□ 1.16
HDLBP-220ENST00000442730 RENBPP51606 427 aa22.32■■□□□ 1.16
HDLBP-220ENST00000442730 ZNF75DP51815 510 aa22.32■■□□□ 1.16
HDLBP-220ENST00000442730 PDK2Q15119 407 aa22.32■■□□□ 1.16
HDLBP-220ENST00000442730 ANKRD20A8PQ5CZ79 823 aa22.32■■□□□ 1.16
HDLBP-220ENST00000442730 NCBP2-AS2Q69YL0 99 aa22.32■■□□□ 1.16
HDLBP-220ENST00000442730 DCP2Q8IU60 420 aaKnown RBP22.32■■□□□ 1.16
HDLBP-220ENST00000442730 TC2NQ8N9U0 490 aa22.32■■□□□ 1.16
HDLBP-220ENST00000442730 KCTD6Q8NC69 237 aa22.32■■□□□ 1.16
HDLBP-220ENST00000442730 RFFLQ8WZ73 363 aa22.32■■□□□ 1.16
HDLBP-220ENST00000442730 CENPTQ96BT3 561 aa22.32■■□□□ 1.16
HDLBP-220ENST00000442730 FAF2Q96CS3 445 aa22.32■■□□□ 1.16
HDLBP-220ENST00000442730 CAAP1Q9H8G2 361 aa22.32■■□□□ 1.16
HDLBP-220ENST00000442730 ATP8A1Q9Y2Q0 1164 aa22.32■■□□□ 1.16
HDLBP-220ENST00000442730 KMT2BQ9UMN6 2715 aaPredicted RBP22.31■■□□□ 1.16
HDLBP-220ENST00000442730 FAM221BA6H8Z2 402 aa22.31■■□□□ 1.16
HDLBP-220ENST00000442730 GOLGA8CPA6NN73 597 aa22.31■■□□□ 1.16
HDLBP-220ENST00000442730 RIOK3O14730 519 aaKnown RBP22.31■■□□□ 1.16
HDLBP-220ENST00000442730 TM7SF2O76062 418 aa22.31■■□□□ 1.16
HDLBP-220ENST00000442730 CR2P20023 1033 aa22.31■■□□□ 1.16
HDLBP-220ENST00000442730 IGFALSP35858 605 aa22.31■■□□□ 1.16
HDLBP-220ENST00000442730 SCNN1BP51168 640 aa22.31■■□□□ 1.16
HDLBP-220ENST00000442730 BCL2L1Q07817 233 aa22.31■■□□□ 1.16
HDLBP-220ENST00000442730 FZD2Q14332 565 aa22.31■■□□□ 1.16
HDLBP-220ENST00000442730 MESDQ14696 234 aa22.31■■□□□ 1.16
HDLBP-220ENST00000442730 TPRG1LQ5T0D9 272 aa22.31■■□□□ 1.16
HDLBP-220ENST00000442730 ERAP2Q6P179 960 aa22.31■■□□□ 1.16
HDLBP-220ENST00000442730 RHOT2Q8IXI1 618 aa22.31■■□□□ 1.16
HDLBP-220ENST00000442730 PGBD5Q8N414 524 aa22.31■■□□□ 1.16
HDLBP-220ENST00000442730 GATA6Q92908 595 aa22.31■■□□□ 1.16
HDLBP-220ENST00000442730 IFT43Q96FT9 208 aa22.31■■□□□ 1.16
HDLBP-220ENST00000442730 CNDP2Q96KP4 475 aaKnown RBP22.31■■□□□ 1.16
HDLBP-220ENST00000442730 MGME1Q9BQP7 344 aa22.31■■□□□ 1.16
HDLBP-220ENST00000442730 MSRB2Q9Y3D2 182 aa22.31■■□□□ 1.16
HDLBP-220ENST00000442730 SPTY2D1-AS1A0A0U1RR47 76 aa22.3■■□□□ 1.16
HDLBP-220ENST00000442730 TTC24A2A3L6 582 aaPredicted RBP22.3■■□□□ 1.16
HDLBP-220ENST00000442730 TRAFD1O14545 582 aaPredicted RBP22.3■■□□□ 1.16
HDLBP-220ENST00000442730 PRKCGP05129 697 aa22.3■■□□□ 1.16
HDLBP-220ENST00000442730 PFN3P60673 137 aa22.3■■□□□ 1.16
HDLBP-220ENST00000442730 GALNT2Q10471 571 aa22.3■■□□□ 1.16
HDLBP-220ENST00000442730 PAFAH1B3Q15102 231 aaKnown RBP22.3■■□□□ 1.16
HDLBP-220ENST00000442730 UNQ6494/PRO21346Q6UXR6 183 aa22.3■■□□□ 1.16
HDLBP-220ENST00000442730 PARGQ86W56 976 aa22.3■■□□□ 1.16
HDLBP-220ENST00000442730 SLC25A45Q8N413 288 aa22.3■■□□□ 1.16
HDLBP-220ENST00000442730 TP53I13Q8NBR0 393 aaPredicted RBP22.3■■□□□ 1.16
HDLBP-220ENST00000442730 MRFAP1L1Q96HT8 127 aa22.3■■□□□ 1.16
HDLBP-220ENST00000442730 C1QTNF7Q9BXJ2 289 aa22.3■■□□□ 1.16
HDLBP-220ENST00000442730 UCKL1Q9NWZ5 548 aa22.3■■□□□ 1.16
HDLBP-220ENST00000442730 INTUQ9ULD6 942 aa22.3■■□□□ 1.16
HDLBP-220ENST00000442730 WDFY3Q8IZQ1 3526 aa22.3■■□□□ 1.16
HDLBP-220ENST00000442730 C1QTNF9BB2RNN3 333 aa22.29■■□□□ 1.16
HDLBP-220ENST00000442730 ENC1O14682 589 aa22.29■■□□□ 1.16
HDLBP-220ENST00000442730 LDOC1O95751 146 aaPredicted RBP22.29■■□□□ 1.16
HDLBP-220ENST00000442730 C1QTNF9P0C862 333 aa22.29■■□□□ 1.16
HDLBP-220ENST00000442730 C6P13671 934 aa22.29■■□□□ 1.16
HDLBP-220ENST00000442730 DGKAP23743 735 aa22.29■■□□□ 1.16
HDLBP-220ENST00000442730 ARHGAP25P42331 645 aa22.29■■□□□ 1.16
HDLBP-220ENST00000442730 MMP13P45452 471 aa22.29■■□□□ 1.16
HDLBP-220ENST00000442730 TCEAL1Q15170 157 aa22.29■■□□□ 1.16
HDLBP-220ENST00000442730 LRRC49Q8IUZ0 686 aa22.29■■□□□ 1.16
HDLBP-220ENST00000442730 MAP7D3Q8IWC1 876 aa22.29■■□□□ 1.16
HDLBP-220ENST00000442730 PQLC3Q8N755 202 aa22.29■■□□□ 1.16
HDLBP-220ENST00000442730 SPOCK2Q92563 424 aa22.29■■□□□ 1.16
HDLBP-220ENST00000442730 RAPGEF5Q92565 580 aa22.29■■□□□ 1.16
HDLBP-220ENST00000442730 NUDCD1Q96RS6 583 aa22.29■■□□□ 1.16
HDLBP-220ENST00000442730 MBNL1Q9NR56 388 aaKnown RBP22.29■■□□□ 1.16
HDLBP-220ENST00000442730 DNAJC28Q9NX36 388 aa22.29■■□□□ 1.16
HDLBP-220ENST00000442730 COQ6Q9Y2Z9 468 aa22.29■■□□□ 1.16
HDLBP-220ENST00000442730 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.28■■□□□ 1.16
HDLBP-220ENST00000442730 TRIM38O00635 465 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms